Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1359 ATGGAAACGTTCACCTTTCTTCTGTTGTGCTTCTTATTGCTGCATGATATAGCCGTTTCCACTGCCATAGAAAGCATTAGTATTACACGGTCCCTCACTGATGGTGACACCATGGTTTCAGCCGGTGGAACCTTTGCAGTTGGATTCTTAAGTATTCCAGAAAGTTCCAAGAACCGTTACCTTGGGATATGGTACAATAAAGTGCCATCTAACACAGTAGCATGGATTGCCAATAGAAACACTCCACTTAATGACTCGTCCGGGGTCTTGAAGATCACTGGCAATGGAACTCTTGCTCTTCATACTCATAACGATACCATCATTTGGCATTCCAACTCATCAAGATTCGCGCAGCGACCAGTTGCAGTGCTTTTGGATTCAGGGAACCTGGTTGTGAAGGAAGAAGGGAGCAATGATGATGATTTGAAGAGTTTCATTTGGCAGAGTTTTGATTACCCTTATGATACGCTACTGCCAGGGATGAAACTGGGAAGTGACTTAACTACAGGCCTTACAAGGTACCTAATATCGCAGATTAGTTCTGATGATCCTTCTGAAGGTAGCTATACTTATCAGCTTAATATTGTTGGATATCCTCAATTATGTATAAAAAATGGCCAATCCGTGACATATAGTAGTGGATCTTGGAACGGTCTTCGGTTTGGTGGAATTCCCCAGTTAAAACATAATAATTTTTACAACTTTTACTTTGTTTACAACAAGGAAGAGATATATTACACATATGAGCTTGTCAATAGCGCTATATATACAAGGTCTGTGCTATCTGCAGACGGATCAATGAATCGTTATGTGTGGAGTGTTAAGAATAAGAGTTGGAGTGCCTATATAATATTACCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTGTATGTAGTTGCTTATTGAACAGATTCGAACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTCTAATGGTTGTGTTAGAATCAACAAATTGAGTTGCCAGGATGATGGATTTGTAAAGTTGTCTGGTTTAAAGTTACCAAACACACAAAGAGCATCATGGTTAAATAATAGCATGAGTCTTGATGAGTGTGCTAATCTATGCATGAAGAATTGTTCCTGCACGGCTTATGCTGCTTTTGATATCAGGGAAGAAGGAAGAGGGTGTTTATTCTGGTATGATGAGCTGATAGATATTAGAGTGCTGAGTGTTCCACAGCAAGATCTTTATGTCAGAATGTCAAGGAAAGATATAGGAAACATGAGACACAGTCCAGAAAGATATACACATGTAATACAAGAGCATCAGGAGGAAGAACTAGAACTACCACTGTTTGATATGGCTACACTTATTGCTGCAACCAATAACTTCTCCACCAGTAACATATTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAAAGATGGAAGAGAAATAGCAGTTAAGAGGCTCTCAGTACATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGTTGAATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGCAGAAGAAAGAATGCTGGTCTATGAATATATGCCAAATAAAAGCTTGGACTACTTCATATTTGATAAAGAGAGAAGCATGCAATTAGTTTGGTCTCAGCGTTTCCTTATTATCATTGGGATTGCACGGGGCATTCTCTATCTCCATCAAGATTCGAGACATCGAATGGTTCATAGAGATCTCAAGGCTAGCAATATTCTGCTAGATGATGAAATGAATGCCAAAATCTCTGATTTTGGACTAGCCAGAAGCTTTATTGGAAATGAAAATGAAGCAAACACAACAACAATTGTCGGAACTTATGGTTATGTATCACCAGAGTACCTAATTGATGGAATTTTCTCAACAAAGTCTGATGTTTATAGCTTCGGTGTGCTTGTATTAGAGATAGTAAGTGGAAAAAGAAATAGAGGATTCAGCAACAGAAATCATCGCTTTAATCTTCTGGGGCATGTATGGAAACTCTTTATAGAAGGTAATTGCTCTGAAATAGTTGATCCGTCCATCAGAAATTCGTCCGATTTATCTGGAGTCACAAGAGCAATTCATGTGGGTCTACTTTGTGTTCAACAGAATCCAGAAGACAGGCCAAGCATGTCGCATGTTCTTATGATGCTGAGTAGCGAATGCACATTGCTTCAACCAAAAATGCCAGGGTTCTTCACTGAGAGAGATCCTGTTGGTGACACATCAAGCAAGAGTGAACTAGTGTCATTTAATGAAGTCACAGTTAGTGTGGTGCATCCACGGTAG 2346 0.3947 METFTFLLLCFLLLHDIAVSTAIESISITRSLTDGDTMVSAGGTFAVGFLSIPESSKNRYLGIWYNKVPSNTVAWIANRNTPLNDSSGVLKITGNGTLALHTHNDTIIWHSNSSRFAQRPVAVLLDSGNLVVKEEGSNDDDLKSFIWQSFDYPYDTLLPGMKLGSDLTTGLTRYLISQISSDDPSEGSYTYQLNIVGYPQLCIKNGQSVTYSSGSWNGLRFGGIPQLKHNNFYNFYFVYNKEEIYYTYELVNSAIYTRSVLSADGSMNRYVWSVKNKSWSAYIILPTDICDDYGKCGAYGICNVANSPVCSCLLNRFEPKVPEEWNQADWSNGCVRINKLSCQDDGFVKLSGLKLPNTQRASWLNNSMSLDECANLCMKNCSCTAYAAFDIREEGRGCLFWYDELIDIRVLSVPQQDLYVRMSRKDIGNMRHSPERYTHVIQEHQEEELELPLFDMATLIAATNNFSTSNILGKGGFGTVYQGMLKDGREIAVKRLSVHSRQGLQEFKSEVLNVVKLQHRNLVKLLGCCIQAEERMLVYEYMPNKSLDYFIFDKERSMQLVWSQRFLIIIGIARGILYLHQDSRHRMVHRDLKASNILLDDEMNAKISDFGLARSFIGNENEANTTTIVGTYGYVSPEYLIDGIFSTKSDVYSFGVLVLEIVSGKRNRGFSNRNHRFNLLGHVWKLFIEGNCSEIVDPSIRNSSDLSGVTRAIHVGLLCVQQNPEDRPSMSHVLMMLSSECTLLQPKMPGFFTERDPVGDTSSKSELVSFNEVTVSVVHPR* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1359 781 Gene3D Phosphorylase Kinase; domain 1 427 541 - -
Amo18g1359 781 CDD PAN_AP_plant 339 421 - -
Amo18g1359 781 Pfam Protein tyrosine and serine/threonine kinase 469 736 IPR001245 GO:0004672|GO:0006468
Amo18g1359 781 SMART blect_4 29 153 IPR001480 -
Amo18g1359 781 PIRSF SRK 1 441 IPR024171 GO:0004674
Amo18g1359 781 PIRSF SRK 429 781 IPR024171 GO:0004674
Amo18g1359 781 SMART serkin_6 466 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1359 781 CDD B_lectin 29 153 IPR001480 -
Amo18g1359 781 SMART ntp_6 342 422 IPR003609 -
Amo18g1359 781 Gene3D Transferase(Phosphotransferase) domain 1 542 745 - -
Amo18g1359 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 218 IPR036426 -
Amo18g1359 781 Pfam D-mannose binding lectin 72 177 IPR001480 -
Amo18g1359 781 ProSiteProfiles Protein kinase domain profile. 466 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1359 781 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Amo18g1359 781 Pfam PAN-like domain 342 408 IPR003609 -
Amo18g1359 781 PANTHER - 11 778 - -
Amo18g1359 781 Gene3D - 18 150 IPR036426 -
Amo18g1359 781 SUPERFAMILY Protein kinase-like (PK-like) 449 737 IPR011009 -
Amo18g1359 781 CDD STKc_IRAK 472 737 - -
Amo18g1359 781 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Amo18g1359 781 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Amo18g1359 781 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 778 - -
Amo18g1359 781 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Amo18g1359 781 Pfam Domain of unknown function (DUF3403) 739 781 IPR021820 GO:0004674
Amo18g1359 781 Gene3D Hepatocyte Growth Factor 340 420 - -
Amo18g1359 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1359 Amo-Chr18 24845276 24849115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1359 454 781 Receptor kinase-like Gene Family AT4G23140 53.216 5.39e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1359 PK_Tyr_Ser-Thr 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1359 - - ahf:112769711 1526.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1359 18 24845276 24849115 Amo18g1359 18 24845276 24849115 ECH