Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1357 ATGGAAAGCTTAACACTGCTGCTACTGTGTCTTTCTCTCGTAAACAATATAGCAATCTCTAATGCAAGAGACACTATTGATAGAGTGCAATTTCTTAGCGATAATGGTGAGACCATAGTTTCAGCTGATGAAACCTTCGCACTAGGATTTTTCAGTCCTGGAACTTCTAAGAACCGTTATGTTGGAATTTGGTATAACAAAGTCCCAAAGGAAACAGTAGTATGGGTTGCCAACAGAAACAAACCCTTAACTGATTCATCAGGAGTTTTGAAGGTTAACGACACTGGAATCTTAGTTCTTCTTGATCGTAGCAACGACATGGTCGTCTGGTCCTCTAATACAACCACAACAGCAACAGGGGATCCAATTGCAAAGCTTTTGAATTCAGGAAATCTTGTTGTGCACGAGAGAAGCAAAGGTGATGACGACTCTAGAGATTTTGTGTGGCAGAGTTTCGATTATCCAAGTGATATAATCCTACCTGGAATAAAACTAGGAAGAAATTTGGTTACTGGTATAAAATGGTCCATAACATCATGGAGCAACTCCAGCGATCCATCTCCAGGTAGATATAGTTTACGATTTGATATAGATGGATGTCCACAGACAATGATGAGAGATGGTTCAACCAAAGTCTTTCGCTTCGGATCATGGAACGGCGTTCAGTTAATAGGACAGGCGGCAGTTACAACAAACTCTATAGTTAAATATAGCTATGTTTTTAATGAGGAAGAGCAATATGGTATGTATGAGCTTATCAATAGTGTAGCCCCTCACAAATTGATGTTACAATCTGATGGAATCATTCGGCGCACGACGTGGAGTAGCGAGAAATCATCTTGGATCACCATTATGTCAAAGCGTGGAGATACTTGCGACAACTACGCAACGTGCGGGTCTTATTCTAGTTGTAATATCAATAGAAATCCTATATGTAGCTGCTTGGATGGGTTTGTGCTGAGTAATAAGCAAGATTCATCTAGCGATTGTGTTAGGAGAACTTCGTTGAATTGCCGTGGAGATGGGTTTCTGAAGCTTTCGGGCTTGAAAATACCTGACACGGAAAAATCATGGTATAATAGAAGTATTAGCCTCGAAGATTGTGAAAGTGAAGCTATTCATCAAAGGAATGAATCGCTTAACTCCAGAATTCGGAAGAAAAAGATTATCATTATAAGTTGTGTATTGTCATTTGGAATTTTAATCTTCATCGTCATCGTCATCTATAGATGGACCTTACAAAAAAACGGTAAAATCAGTGACCACCTCGACGAAGAAATAGAATTACCGTTGTTTGATATGTCCACAATTATTTCTGCAACCAATAATTTTTCTGCGGAAAACATACTCGGGAAAGGTGGCTTTGGATCAGTATACAAGGGTATCTTAAAAGATGGACAAGAAATTGCTGTAAAGAGACTTTCACAAAATTCAAGTCAAGGACTTCAAGAGTTTAAAAATGAAGCTATGCATATTGCCAAACTTCAACACAGAAATTTAGTGAAGCTATTAGGGTTTTGTATTCAAGCAGAAGAAATATTATTGGTTTATGAATTTATGCACAACAAAAGCTTGGATTTCTTCATATTCGATCATGAAAGAGGAAAATTATTAAACTGGCCTATTCGTTTTCTTATAATAAATAGAATCGTTAAAGGTCTTCTTTATTTTCATCAAAATTCAAGGCATAGAATTGTTTATAGAGATCTCAAGGCAGGAAATATTCTATTAGATAATAAATTGAATCCCAAAATCTCGGACTTTGGACTGGCAAGAAGTTTTGTAGGAAATGAAAACGAAGCAAACACAAGACATGTGGCCGGAACTTACGGTTATTTATCACCCGAATACATAGTTGATGGACTATACTCAACCAAATCCGATATCTATAGCTTTGGTGTACTGATACTAGAAATAGTCAGTGGAAAGAGAAATAGAGGATTCACCCATATCAATCACCACTTTAATCTTCTTGGTCATGCGTGGAAACTTTTCGTTGAAGACAAGTGCTTAGAAATGGTGAATGCAACCTTCAGAGACTCAATTGATTCTTCACCAGAAGAAGTGATAAGATCAATTCATGTGGGTTTATTATGTGTTCAACGAAATCCAGAAGACCGGCCAAGTATGTCGGATGTGCTTATGATGCTGAGTAGTGAATGGCCATTGCCTCAACCAAAGAAGCCGGAGTTTTTTATTGAGAGAGATGTGATTGTTGATGACACTTCATCAAGTAACCATGAAATACCATCATCAATTAATCAGCTCACAATTAGCGATATCAATCCACGTTTGTAA 2298 0.376 MESLTLLLLCLSLVNNIAISNARDTIDRVQFLSDNGETIVSADETFALGFFSPGTSKNRYVGIWYNKVPKETVVWVANRNKPLTDSSGVLKVNDTGILVLLDRSNDMVVWSSNTTTTATGDPIAKLLNSGNLVVHERSKGDDDSRDFVWQSFDYPSDIILPGIKLGRNLVTGIKWSITSWSNSSDPSPGRYSLRFDIDGCPQTMMRDGSTKVFRFGSWNGVQLIGQAAVTTNSIVKYSYVFNEEEQYGMYELINSVAPHKLMLQSDGIIRRTTWSSEKSSWITIMSKRGDTCDNYATCGSYSSCNINRNPICSCLDGFVLSNKQDSSSDCVRRTSLNCRGDGFLKLSGLKIPDTEKSWYNRSISLEDCESEAIHQRNESLNSRIRKKKIIIISCVLSFGILIFIVIVIYRWTLQKNGKISDHLDEEIELPLFDMSTIISATNNFSAENILGKGGFGSVYKGILKDGQEIAVKRLSQNSSQGLQEFKNEAMHIAKLQHRNLVKLLGFCIQAEEILLVYEFMHNKSLDFFIFDHERGKLLNWPIRFLIINRIVKGLLYFHQNSRHRIVYRDLKAGNILLDNKLNPKISDFGLARSFVGNENEANTRHVAGTYGYLSPEYIVDGLYSTKSDIYSFGVLILEIVSGKRNRGFTHINHHFNLLGHAWKLFVEDKCLEMVNATFRDSIDSSPEEVIRSIHVGLLCVQRNPEDRPSMSDVLMMLSSEWPLPQPKKPEFFIERDVIVDDTSSSNHEIPSSINQLTISDINPRL* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1357 765 Pfam Domain of unknown function (DUF3403) 718 764 IPR021820 GO:0004674
Amo18g1357 765 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 186 IPR036426 -
Amo18g1357 765 ProSiteProfiles Protein kinase domain profile. 444 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1357 765 Pfam Protein kinase domain 446 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1357 765 CDD STKc_IRAK 450 717 - -
Amo18g1357 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Amo18g1357 765 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 378 - -
Amo18g1357 765 Gene3D - 18 152 IPR036426 -
Amo18g1357 765 SMART serkin_6 444 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1357 765 Gene3D Phosphorylase Kinase; domain 1 409 519 - -
Amo18g1357 765 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Amo18g1357 765 PIRSF SRK 1 375 IPR024171 GO:0004674
Amo18g1357 765 PIRSF SRK 369 764 IPR024171 GO:0004674
Amo18g1357 765 PANTHER - 12 378 - -
Amo18g1357 765 SUPERFAMILY Protein kinase-like (PK-like) 427 752 IPR011009 -
Amo18g1357 765 SMART blect_4 30 155 IPR001480 -
Amo18g1357 765 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 413 761 - -
Amo18g1357 765 ProSitePatterns Protein kinases ATP-binding region signature. 450 472 IPR017441 GO:0005524
Amo18g1357 765 PANTHER - 413 761 - -
Amo18g1357 765 Pfam D-mannose binding lectin 72 180 IPR001480 -
Amo18g1357 765 Gene3D Transferase(Phosphotransferase) domain 1 520 723 - -
Amo18g1357 765 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Amo18g1357 765 CDD B_lectin 35 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1357 Amo-Chr18 24682428 24692981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1357 389 764 Receptor kinase-like Gene Family AT4G23220 47.668 1.39e-111 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1357 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1357 - - ahf:112705340 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1357 18 24682428 24692981 Amo18g1357 18 24682428 24692981 ECH