Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1355 ATGTCCACAATTATTTCTGCAACCAATAATTTTTCTGCTGACAACATACTTGGAAAAGGTGGTTCTGGATCAGGTATTTTAAAAGATGGACAAGAAATAGCTGTCAAGAAGCTTTCACGAAATTCAAGTCGAAGACTCCAAGAGTTTAAAAATGAAGCTATGCACATTGCCAAACTTCAGCATAGAAATTTAGTGAAGCTATTAGGATTCTGCATTCAAGAAGAAGAAAGATTGTTGGTTTATGAATTTATGCGCAACAAAAGCTTGGACTTCTTCATATTCGATTATGAAAGAGGAAAACTATTAGACTGGCATAAGCGTTTTTTTATAATAAATGGAATTGTCAAAGGTCTTCTCTATCTTCATCATGATTCAAGGCATATAATTATTCACAGAGATCTTAAGGCTAAAAATATTCTGTTAGATGACGAATTGAATCCTAAAATCTCAGACTTTGGACTAGCAAGAAGTTTCGTAGGAAATGAAAATGAAGATAACACGAGCCATATCACTGGAACTTAG 522 0.3372 MSTIISATNNFSADNILGKGGSGSGILKDGQEIAVKKLSRNSSRRLQEFKNEAMHIAKLQHRNLVKLLGFCIQEEERLLVYEFMRNKSLDFFIFDYERGKLLDWHKRFFIINGIVKGLLYLHHDSRHIIIHRDLKAKNILLDDELNPKISDFGLARSFVGNENEDNTSHITGT* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1355 173 Gene3D Transferase(Phosphotransferase) domain 1 84 173 - -
Amo18g1355 173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Amo18g1355 173 Pfam Protein kinase domain 14 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1355 173 SUPERFAMILY Protein kinase-like (PK-like) 3 172 IPR011009 -
Amo18g1355 173 SMART serkin_6 11 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1355 173 ProSiteProfiles Protein kinase domain profile. 11 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1355 173 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 2 173 - -
Amo18g1355 173 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 173 - -
Amo18g1355 173 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1355 Amo-Chr18 24576015 24580936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1355 3 173 Receptor kinase-like Gene Family AT4G21410 61.932 1.45e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1355 Pkinase 5.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1355 - - ahf:112705340 314.309