Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1333 ATGAATCCAAAAATATCAGACTTCGGGCTAGCTAGAAGTTTTGGAGGGAACGAAACTAAAGCAAACACTCGGCATGTTGTTGGAACTTATGGATATTTATCACCGGAATACATAATTGATGGAGTTTACTCAATAAAATCTGATGTATTCAGTTTTGGTGTATTGCTGTTAGAAATAGTGAGTGGAAGTAGAAATAGAGGATTCATTCATCAAGATCATCACTTTAATCTTCTAGGACATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTTATGCTCCAATAAGAGATGCATCTAATTTATCTTCAATGCTAAGATCAATTCATGTGGGACTACTTTGTGTGCAAAAAAGTCCAGATGAAAGGCCAAACATGTCATACGTTGTTCAAATGTTGAGTAGTGAATCCACACTACCTCCACCTAAAATGCCTGGATTCTTCACAGAAAGAGAAATGGTTGATGAAGGTTCTTCTCCAAGTAATAACAGAACATACTCAATCAATGATGTCACAGACAGCATATTGGAGGCTAGATAG 546 0.3626 MNPKISDFGLARSFGGNETKANTRHVVGTYGYLSPEYIIDGVYSIKSDVFSFGVLLLEIVSGSRNRGFIHQDHHFNLLGHAWKLFMEDKGYEIIYAPIRDASNLSSMLRSIHVGLLCVQKSPDERPNMSYVVQMLSSESTLPPPKMPGFFTEREMVDEGSSPSNNRTYSINDVTDSILEAR* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1333 181 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1333 181 Pfam Domain of unknown function (DUF3403) 136 181 IPR021820 GO:0004674
Amo18g1333 181 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 1 155 - -
Amo18g1333 181 SUPERFAMILY Protein kinase-like (PK-like) 2 158 IPR011009 -
Amo18g1333 181 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Amo18g1333 181 Pfam Protein tyrosine and serine/threonine kinase 4 135 IPR001245 GO:0004672|GO:0006468
Amo18g1333 181 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1333 Amo-Chr18 24264139 24264987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1333 1 181 Receptor kinase-like Gene Family AT4G23150 45.989 1.29e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1333 PK_Tyr_Ser-Thr 3.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1333 - - ahf:112769704 277.715