Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1323 ATGCCTAATAAAAGCTTAGACGGCTTTATTTTTGATCAAACACGGAGAAAATTATTGGATTGGCCTAAGCGTTTCAACATCATTTGTGGGATTTCTAGAGGCCTACTTTATCTTCACGAGGATTCTAGGTTGAGGATTATACATAGAGATCTCAAAGCAAGTAACATTTTATTGGACAATGAGATGGATCCAAAGATCTCTGACTTTGGTTTGGCTCGATGTTTTGGAGGAGATCAAAGCAAAGGAAATACAAAGAAAATAGTAGGAACTTTTGGATATATGGCACCAGAATATGCTATTAGTGGACACTTCTCGGTAAAATCTGATGTGTTCAGTTTCGGAATTTTGTTGCTGGAGATAATCACAGGGAGAAAAAATAGAGGGATATATTTTCCAAGTGACAATGTGAATCTATATGGACATGCATGGGATCTATGGAAGCAAGGAAGGTCCTTAGAACTAGTTGATGAATGCCTTAAGGAGTCATGGAATTCGTCGGAAGCGCAGCGCTGCATCCACATTTGCCTGCTATGCGCGCAGCAGCATCCGCAAGATAGGCCGGACATGTCATCTGTGGTTCTGATGTTAGGAAGTGAAATCGATTTGCCTCAACCAAAGTTTCCTACTTTCATCATTGGTGGAAATTCTGATGGCAAAAGTTCTTCCTCTTGTCAAAATGAAATAAGCATTACAGAGGTGGAACCTCGATAA 711 0.4008 MPNKSLDGFIFDQTRRKLLDWPKRFNIICGISRGLLYLHEDSRLRIIHRDLKASNILLDNEMDPKISDFGLARCFGGDQSKGNTKKIVGTFGYMAPEYAISGHFSVKSDVFSFGILLLEIITGRKNRGIYFPSDNVNLYGHAWDLWKQGRSLELVDECLKESWNSSEAQRCIHICLLCAQQHPQDRPDMSSVVLMLGSEIDLPQPKFPTFIIGGNSDGKSSSSCQNEISITEVEPR* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1323 236 SUPERFAMILY Protein kinase-like (PK-like) 1 201 IPR011009 -
Amo18g1323 236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Amo18g1323 236 MobiDBLite consensus disorder prediction 214 236 - -
Amo18g1323 236 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 232 - -
Amo18g1323 236 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1323 236 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
Amo18g1323 236 MobiDBLite consensus disorder prediction 214 230 - -
Amo18g1323 236 Pfam Protein tyrosine and serine/threonine kinase 5 194 IPR001245 GO:0004672|GO:0006468
Amo18g1323 236 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 232 - -
Amo18g1323 236 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1323 Amo-Chr18 23693679 23695751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1323 1 236 Receptor kinase-like Gene Family AT4G11530 55.823 1.54e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1323 Pkinase 2.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1323 - - adu:107462470 409.068