Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1322 ATGCTGATGGATTGGTCTAAACGATTTCACATAATTTGCGGAATCGCTAAGGGTCTTCTTTATCTTCATCAAGATTCAAGACTCATAATTATTCATAGAGATCTTAAGACAAGCAACATATTGTTGGATAGTGAGATGAATCCTAAGATATCGGACTTCGGCTTGGCTAGAATTTTAGAGGTGGACCAAACCTCAAAAACTTCGCGCGTCGTTGGAACTTATGGATACATGGCACCAGAATATGCATTAGATGGAAACTTTTCGATAATATCTGGAAAGAAAAATAAAGGAAACCATCGCCAGAAAGACGGTACAAACCTTATTGAATATGCATGGAATTTCTGGACAGAAGGAAGGCCCTTAGAATTGATTGATGAATATATGATAGACTATTGCAATATCTCTGAAGCGTTGCGATGCATCCAAATTGGTCTTTTGTGTGTGCAACAAAATCCACATGATAGACCAAACATATCATTTGTGGTTATGATGTTAGGTAGTGAAATTCAATTGCCTCTTCCAAAAGAACCAGCTCTTTTTGTTGGAAAGTATTCATGTCAGGAATATTCTTCTTCATGTATAAATGATGCACCTTCTGTTAATGAGTTAAGTATCTCAGATTTAGAAGCTCCTGCAACAGATACCTTAACTCAATTCCAGTCTCTAAGTGAAAACCAGACATTAGTTTCCAAGAATGGAGACTTTGAACTTGGTTTCTTCACTCTTGATAACTCCACCAACATCAATTATTACCTTGGCATTTGGTACAAGAACATCCCAGTCAGAACCATAGTTTGGGTTGCAAATCGTGAAAATCCCGCCACAAATCACAACTTTGTTGTGTTGCTGATAAACAACACAGCAAATAGCACAATCCTCCTTACTCAGAAAAACAAGAACACTGTTCTATGGTCTGTGAGCATATCAAGAAAACCCAAGAATCCAATTCTACAACTGTTGGATTCAGGAAACCTTGTTCTGAGAGATGAAAATGATGAGAATGAAGAGAAGAACTATCTATGGCAAAGTTTTGATTATCCTGGAGATACACTCTTGCCAGGAATGAAGGTTGGGAAGGATTTAAGAACTGGTTTTGATTGGCGCGTAACGGCGTGGAAGAATGAGAATGATCCTTCACCAGGAACCTTGAATTGGGTTATGGATGTTACCAATTGGCCTGAACCGATGCAGAGGATTGGAACAATGAAGCAGTACAATAGTGGTCCTTGGAATGGAGTTCAATACAGTGCCAAACCAACAAACAAGCCTAGCCCAGCTTTCGAGTTCATCTACTTTGCTGATGAAAACCAAGTTTACTACATGTTCAAACTTGTTAACAACTCTGTCAAAGCTAGAATGATGTTGAACCAAACCACAAACAAGATTATGCAGCTTGTGTGGACACAAGGTGTTTGGAAGATGTATGGTTCGATGCCAAGGGATTTTTGTGATGAGTATGGTGCTTGTGGTCCTAATGGGAAATGTGACATGGCTGAGTCTCCAAATGATTGTGAATGTTTGAGAGGGTATAGGCCTAAGTCGCCAAAAGAATGGATCGGATTGAATTATGAAGGAGGTTGCTTGCGCGACAAGCCACTGAATTGCGAAAGCGACGGGTTTATCAAGTATGTTAAGATGAAGGTGCCTGATACTGAGAATTGTTGGTACTTAAATCAGAGTATGAACTCGGTTGAGTGCAGAGATAAGTGCTTGAGGAATTGTTCTTGTATGGCTTATGCGAATTCGGATATTCGAGGAGAAGGCAATGGTTGTGCTTTGTGGTTTGGTGATCTTAATGACTTGAGAGTTCAACCAAATGCAGGGCAAGATCTTTATGTTAGAGTTCCTGCCTCAGAATTAGTTCTCTACTTCACTTGCATAAGAAGAAGAAGTTCCAAGGCCAAAGAGAATGCAGCAATAATGGATAGTTTCATTGAAGAACAAGAGGGTCATCTAGAGCTTCCATTGTTTGATCTATCTAGTTTAGCTAAAGCTACTGATCAAACGCGGAGAAAGCTCTTGGATTGGTCGAAGTGCTTCCATATGATTTTTGGGATTGCAAAGGGGCTCCTTTATCTTCATCGAGATTCAAGACTTAGAATCATTCACAGAGATCTTAAAGCAAGTAATGTCTTACTTGACAGTGAAATGAATCCTAAAATATCAGATTTTGGCATGGCTAGAATTTTGGGAGGAGACCAAATTGCAGCAACGACGCGACGAGTGGTTGGAACATATGGATATATGGCACCAGAATACGCAATAGATGGAAACTTCTCGGTAAAATCTGATGTCTTTAGCTTTGGCATTTTGTTACTGGAGATACTATCCGGAAAGAAAAACAAAGGAAATCATTGGGAAAATGAAAGCACGGACCTTATTGGTTATGCATGGGATTTGTGGACAGAAGAAAGGCCTCTAGAAATTGTTGATGATATCCTAAAAGAGTCTTGTAACCTCTCTGAAATATTGAGATGCATTCAGATTAGTCTTCTTTGTTTGGAGCAACATCCATATGACAGACCAGACATGTCATCAGTGATTATGATGTTTGGAAGTGAAATTCCCTTGCCTAAGCCAAAGCAACCTGCTCTAGTTGTTGGAGAATATGCATATCAATATGATTCTGCCAATGAATTAACAAATGGGAACTGTGATCTTACAAACTCAAAAATATGCGTGTGTTTAGATGGTTTCACACCAAAGGACCCAACTTCCTATGATTCCTCAGACTTCAAAATGGGATGTGTTAAGAACAAAGCATGGAATTGCAGCACTGATGTGTTTGTTAGATACTCTGTGCTTCATGAACCAAATGGAACTTCTTCTTTGTTGAACCAACAAAGCTTGGGAGGTGAAGATTGCAAGGGAAAGTGCTCTAGTGATTGTTCTTGCATGGCTTATACTATAATTGGGACTGGTTGCAAATTGTGGAGTGGTGATTTGTTTGATGTTAGGTTCGTTAAGGAAGGAGGTCAAGGTATCTATATTAGAACACCAGCTTCGGATAAAGGGAAAAAGGGTGGTGGAGGGGGAAATCAAGGTAAAAATGAGGGATTGGTCGTAGGAATAGTTGTTGGCAGCACGATAATTGTGATTTCTGGGATGATTGTGGCTTCTTGTTGCTTTCTCAGGAAGAGAACACAGTCAAAAGCATTGGGACATGTAAGGATAAATGAGATGGTTAGTTATCAAACTCATACCAATGAACAAAAGGAAGATCTGGGGCTTCCATTATTTGATCTGAAAAGAATAGCTGTGGCCACTGATAATTTCTCCCCCAACAATAAGCTTGGAGAAGGCGGTTTTGGCCCTGTATACAAGGGTATACTAGATGATGGGCGACAAATTGCTGTGAAGAGGCTTTCAAGTAGTTCTGGTCAAGGCCTACATGAGTTCAAAACAGAAGTAAAACTAATAGCTAAACTTCAACACCGTAATCTTGTAAAGCTTTTTGGATGTTGCATCCAAGAAAAGGAGAAACTACTCATTTACGAATACATGCCTAACAGAAATCAAACACAAGGGAATGTTTTGGATTGGCCTAAGCGCTTTAATATCATTCGTGGGATTGCTAGAGGCTTGCTCTATCTTCATCAAGATTCAAGGTTGAGAATTATACATAGAGATCTTAAAGCAAGTAATGTTRTGTTAGATAATAAGTTGGACCCCAAGATATCAGACTTTGGTTTAGCTAGAAGTTTTGGAGGGGATCAGAGTAACGCAAATACAAACAGAGTTGTCGGAACTTTCGGATATATGGCTCCAGAATATGCTGTTAATGGACAATTTTCAGTCAAATCTGATGTCTTTAGCTTCGGAGTTTTAATACTTGAAATCGTATCCGGAAAGAGAAATAGAAAATTTTATTATTCAAACAACAACGATAGCCTATATGGGCATGCATGGGATTTATGGAAGCAAGGAAGGTCACTAGAGCTTGTAGATGAAAGCCTCAAAGATTCATGGAATTTGAGTGAAGTAGAACGTTGTATCCACATTGGTCTCCTTTGTGCACAACAATATCCCCATGATAGGCCAACCATGTCTTCTGTGGTTCTAATGTTGGGAAGTGATTTTGATTTGCCTCTACCTGAAATTCCTACATTTTTCATTGTTGAACCTTTTGATGCTTCAAGCTCCTCCACTGATATAGATAGTATATCTCTAACCGAAAACCAAACCTTACTTTCCATCAACACAACCTTCCAACTTGGTTTCTTCACTCCTAACAACTCTAAAAACCGCTACCTCGGCATATGGTACAACAATCTCCCGGTTCAAACCGTGGTATGGGTCGCGAACCGAGAGAAACCAATCACAACAAACATCCCTTCTGTTTTGAAGAAAAACACCACACAAAACAGCACCACACTTGTCGTCCTCCAGAACAACTCTGTTATATGGTCTACACCGCCGTCGAGACGCGCTTCCAATCCGGTTCTTCAGCTACTGGACTCAGGGAACCTTAGTTTTGATTACCCTTCTGACACGCTTCTTTCAGGGATGAAGCTAGGGAAGAACTTGAAAACCGGCCTGGATCGACGCGTGACCGTGTGGAAAACCGTGGATGATCCTTCACTGGGAAACTTAACTTGGATGATGGAAGTTACAACCTGGCCACATCCAATACAAACAACAGGATCAAAGAAACAATTCGACAGTGGACCGTGGAATGGATTGGTCTACAGCAGCATGCCAACCAGAGTTCGCCAACCAACTTTCGATTATGTCTATGTCTCCAATGAGGATGAAGTTTACTTCATGTTCCATCTTGTTAACAACTCTGTTCCAACAAGAATGGTGCTGGATGCAACTTCTTACAAGCGTCAGTACTCGGTTTGGGACTACGGTTCGCAAGAATGGAAGGCTTATAACTCGCTGCCGCGAGATTTTTGCGAGCAATACGGCGTTTGCGGCCCCAATGGGAACTGTGATTTGTCAAAGTTGCCTGCTCAGGCATGTGATTGTTTGAGAGGGTTTAGGCCCAAGTCGCCGGAAGAATGGAATCGACAGAACCGTCTCTACGGTTGCTTGCGTGACAAGCCACTGAATTGCGGAGGTGATAAGTTTGTGAAGTATGAAAAGATGAAAGTGCCTGATACTGTGAATTGTGGTACCTGA 5124 0.4063 MLMDWSKRFHIICGIAKGLLYLHQDSRLIIIHRDLKTSNILLDSEMNPKISDFGLARILEVDQTSKTSRVVGTYGYMAPEYALDGNFSIISGKKNKGNHRQKDGTNLIEYAWNFWTEGRPLELIDEYMIDYCNISEALRCIQIGLLCVQQNPHDRPNISFVVMMLGSEIQLPLPKEPALFVGKYSCQEYSSSCINDAPSVNELSISDLEAPATDTLTQFQSLSENQTLVSKNGDFELGFFTLDNSTNINYYLGIWYKNIPVRTIVWVANRENPATNHNFVVLLINNTANSTILLTQKNKNTVLWSVSISRKPKNPILQLLDSGNLVLRDENDENEEKNYLWQSFDYPGDTLLPGMKVGKDLRTGFDWRVTAWKNENDPSPGTLNWVMDVTNWPEPMQRIGTMKQYNSGPWNGVQYSAKPTNKPSPAFEFIYFADENQVYYMFKLVNNSVKARMMLNQTTNKIMQLVWTQGVWKMYGSMPRDFCDEYGACGPNGKCDMAESPNDCECLRGYRPKSPKEWIGLNYEGGCLRDKPLNCESDGFIKYVKMKVPDTENCWYLNQSMNSVECRDKCLRNCSCMAYANSDIRGEGNGCALWFGDLNDLRVQPNAGQDLYVRVPASELVLYFTCIRRRSSKAKENAAIMDSFIEEQEGHLELPLFDLSSLAKATDQTRRKLLDWSKCFHMIFGIAKGLLYLHRDSRLRIIHRDLKASNVLLDSEMNPKISDFGMARILGGDQIAATTRRVVGTYGYMAPEYAIDGNFSVKSDVFSFGILLLEILSGKKNKGNHWENESTDLIGYAWDLWTEERPLEIVDDILKESCNLSEILRCIQISLLCLEQHPYDRPDMSSVIMMFGSEIPLPKPKQPALVVGEYAYQYDSANELTNGNCDLTNSKICVCLDGFTPKDPTSYDSSDFKMGCVKNKAWNCSTDVFVRYSVLHEPNGTSSLLNQQSLGGEDCKGKCSSDCSCMAYTIIGTGCKLWSGDLFDVRFVKEGGQGIYIRTPASDKGKKGGGGGNQGKNEGLVVGIVVGSTIIVISGMIVASCCFLRKRTQSKALGHVRINEMVSYQTHTNEQKEDLGLPLFDLKRIAVATDNFSPNNKLGEGGFGPVYKGILDDGRQIAVKRLSSSSGQGLHEFKTEVKLIAKLQHRNLVKLFGCCIQEKEKLLIYEYMPNRNQTQGNVLDWPKRFNIIRGIARGLLYLHQDSRLRIIHRDLKASNVXLDNKLDPKISDFGLARSFGGDQSNANTNRVVGTFGYMAPEYAVNGQFSVKSDVFSFGVLILEIVSGKRNRKFYYSNNNDSLYGHAWDLWKQGRSLELVDESLKDSWNLSEVERCIHIGLLCAQQYPHDRPTMSSVVLMLGSDFDLPLPEIPTFFIVEPFDASSSSTDIDSISLTENQTLLSINTTFQLGFFTPNNSKNRYLGIWYNNLPVQTVVWVANREKPITTNIPSVLKKNTTQNSTTLVVLQNNSVIWSTPPSRRASNPVLQLLDSGNLSFDYPSDTLLSGMKLGKNLKTGLDRRVTVWKTVDDPSLGNLTWMMEVTTWPHPIQTTGSKKQFDSGPWNGLVYSSMPTRVRQPTFDYVYVSNEDEVYFMFHLVNNSVPTRMVLDATSYKRQYSVWDYGSQEWKAYNSLPRDFCEQYGVCGPNGNCDLSKLPAQACDCLRGFRPKSPEEWNRQNRLYGCLRDKPLNCGGDKFVKYEKMKVPDTVNCGT* 1708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1322 1707 SUPERFAMILY alpha-D-mannose-specific plant lectins 264 378 IPR036426 -
Amo18g1322 1707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Amo18g1322 1707 SUPERFAMILY Protein kinase-like (PK-like) 641 864 IPR011009 -
Amo18g1322 1707 ProSiteProfiles Bulb-type lectin domain profile. 213 340 IPR001480 -
Amo18g1322 1707 Gene3D Transferase(Phosphotransferase) domain 1 1166 1361 - -
Amo18g1322 1707 Gene3D Transferase(Phosphotransferase) domain 1 2 171 - -
Amo18g1322 1707 Gene3D Transferase(Phosphotransferase) domain 1 658 855 - -
Amo18g1322 1707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
Amo18g1322 1707 Gene3D Phosphorylase Kinase; domain 1 1053 1165 - -
Amo18g1322 1707 CDD STKc_IRAK 1098 1356 - -
Amo18g1322 1707 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1322 1707 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1389 1705 - -
Amo18g1322 1707 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 881 1378 - -
Amo18g1322 1707 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 204 - -
Amo18g1322 1707 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 221 668 - -
Amo18g1322 1707 Pfam Protein kinase domain 10 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1322 1707 Pfam Protein kinase domain 1095 1353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1322 1707 ProSiteProfiles Protein kinase domain profile. 1092 1371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1322 1707 SUPERFAMILY Protein kinase-like (PK-like) 1076 1383 IPR011009 -
Amo18g1322 1707 Pfam PAN-like domain 535 601 IPR003609 -
Amo18g1322 1707 Pfam PAN-like domain 924 985 IPR003609 -
Amo18g1322 1707 ProSiteProfiles PAN/Apple domain profile. 924 1000 IPR003609 -
Amo18g1322 1707 Pfam S-locus glycoprotein domain 405 514 IPR000858 GO:0048544
Amo18g1322 1707 Pfam S-locus glycoprotein domain 1554 1665 IPR000858 GO:0048544
Amo18g1322 1707 Gene3D - 208 344 IPR036426 -
Amo18g1322 1707 Gene3D - 1385 1500 IPR036426 -
Amo18g1322 1707 ProSiteProfiles Bulb-type lectin domain profile. 1381 1505 IPR001480 -
Amo18g1322 1707 CDD B_lectin 1390 1495 IPR001480 -
Amo18g1322 1707 ProSiteProfiles PAN/Apple domain profile. 535 616 IPR003609 -
Amo18g1322 1707 SUPERFAMILY alpha-D-mannose-specific plant lectins 1430 1526 IPR036426 -
Amo18g1322 1707 SMART ntp_6 535 615 IPR003609 -
Amo18g1322 1707 SMART ntp_6 924 999 IPR003609 -
Amo18g1322 1707 CDD PAN_AP_plant 532 616 - -
Amo18g1322 1707 SMART serkin_6 1092 1356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1322 1707 ProSiteProfiles Protein kinase domain profile. 579 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1322 1707 SMART blect_4 219 347 IPR001480 -
Amo18g1322 1707 SMART blect_4 1387 1495 IPR001480 -
Amo18g1322 1707 CDD PAN_AP_plant 912 1000 - -
Amo18g1322 1707 CDD B_lectin 220 347 IPR001480 -
Amo18g1322 1707 Pfam Protein tyrosine and serine/threonine kinase 659 849 IPR001245 GO:0004672|GO:0006468
Amo18g1322 1707 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 667 871 - -
Amo18g1322 1707 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1389 1705 - -
Amo18g1322 1707 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 881 1378 - -
Amo18g1322 1707 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 2 204 - -
Amo18g1322 1707 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 221 668 - -
Amo18g1322 1707 Pfam D-mannose binding lectin 1429 1521 IPR001480 -
Amo18g1322 1707 Pfam D-mannose binding lectin 263 373 IPR001480 -
Amo18g1322 1707 ProSiteProfiles EGF-like domain profile. 1629 1667 IPR000742 -
Amo18g1322 1707 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 667 871 - -
Amo18g1322 1707 SUPERFAMILY Protein kinase-like (PK-like) 3 181 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1322 Amo-Chr18 23661753 23685684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1322 667 867 Receptor kinase-like Gene Family AT4G23230 54.455 1.04e-68 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1322 Pkinase 5.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1322 - - adu:107462330 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1322 18 23661753 23685684 Amo18g1322 18 23661753 23685684 ECH