Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1321 ATGAATCTTGATGAGTGCAGAACGAAATGTTTGGGGAATTGTTCTTGTGTGGCTTATACGAATTCGGATATTAGAGGTGAAGGTAGTGGTTGTGCTTTGTGGTCTGATTCAAACAATGGACGAAAGGTCAAGATAGGAGTTGGAGTTGGAGTCTCAGTTGGCGTATTATGTGGCCTTCTCTTAGCATTCTGTTTGATATGGAAAAGGCGAAAAAGGGCCACTCTGAAAGAGACTAATGCAGCATTAAAGGATCAGTCCAAGGAAGAACAAGAGGAAGATCCAGAGGTTCCATTATATGACCTATCAGTTATAGCTTCTTCCACTGATAACTTTTCAGACAAAAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTGTTTAAGGGAACATTAGAAAATGGGCAAAGAATTGCAGTTAAGAGACTTTCAGTTAGTTCCGGACAAGGGATCAAGGAATTTAAGAATGAAATTGCCTTGATAGCCAAACTTCAGCATCGTAATCTTGTAAAGCTTCATGGATATTGCATTCAAAATGAAGAGAAATTACTTATATACGAATATATGCCTAATAAAAGTTTGGATTTCTTTATATTTGATCAAACACAAAGAACAGTATTGGATTGGCCAAGACGATTTCATATAATTTGTGGCATTGCAAGAGGTCTTCTTTATCTTCATCAAGATTCAAGACTTAGAATAATTCATAGAGATCTTAAAGCAAGTAATGTTTTACTAGACGATGAGATGAATCCTAAAATATCAGACTTTGGATTAGCTAGAATTTTGGGAGGAGACCAAACTGCAGATTCTACACGTCGGAATATTTTAACAACGGTCTTTGATTGTCATCTTATATTGTTTGTTAGTGGATACATAGCACCAGAATACGCGATAGATGGAAACTTCTCAATAAAATCAGACGTATTTAGCTTTGGTGTTTTGCTGTTGGAGATAATATCAGGAAGGAAAAACAGAGGAGAACACAATCAAAAAGAAAGTACAAGCCTTATTGGACATGCATGGAATTTATGGATACAAGAGAGGCCATTGGACTTGGTTGGTGAATACCTGAAAGAATCTTGTAATGCTTCTGAAGCATTGCGTTGCATTCATATTAGTTTCCTGTGTCTGCAGCAGCATCCACATGACAGGCCAGAGATGTCATCTGTAATTTTGATGTTGGGTAGTGAAATTGGTTTGCCTAAGCCAAAACAACCGGCTCTATTTGTTAGAGAATATTCTTCTTCTAATAAGGATTATTCTTCATCAAATAAGAGTAATTTAGCTTCTGTCAATGAATTAAGTATCTCCAATGTAGAAGCTCGTTAG 1326 0.368 MNLDECRTKCLGNCSCVAYTNSDIRGEGSGCALWSDSNNGRKVKIGVGVGVSVGVLCGLLLAFCLIWKRRKRATLKETNAALKDQSKEEQEEDPEVPLYDLSVIASSTDNFSDKNKLGEGGFGPVFKGTLENGQRIAVKRLSVSSGQGIKEFKNEIALIAKLQHRNLVKLHGYCIQNEEKLLIYEYMPNKSLDFFIFDQTQRTVLDWPRRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDEMNPKISDFGLARILGGDQTADSTRRNILTTVFDCHLILFVSGYIAPEYAIDGNFSIKSDVFSFGVLLLEIISGRKNRGEHNQKESTSLIGHAWNLWIQERPLDLVGEYLKESCNASEALRCIHISFLCLQQHPHDRPEMSSVILMLGSEIGLPKPKQPALFVREYSSSNKDYSSSNKSNLASVNELSISNVEAR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1321 441 SUPERFAMILY Protein kinase-like (PK-like) 94 410 IPR011009 -
Amo18g1321 441 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 424 - -
Amo18g1321 441 Pfam Protein tyrosine and serine/threonine kinase 114 390 IPR001245 GO:0004672|GO:0006468
Amo18g1321 441 Gene3D Phosphorylase Kinase; domain 1 71 186 - -
Amo18g1321 441 SMART serkin_6 111 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1321 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Amo18g1321 441 Gene3D Transferase(Phosphotransferase) domain 1 187 398 - -
Amo18g1321 441 CDD STKc_IRAK 117 393 - -
Amo18g1321 441 ProSiteProfiles PAN/Apple domain profile. 1 57 IPR003609 -
Amo18g1321 441 ProSiteProfiles Protein kinase domain profile. 111 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1321 441 CDD PAN_AP_plant 1 43 - -
Amo18g1321 441 Pfam PAN-like domain 1 36 IPR003609 -
Amo18g1321 441 Coils Coil 68 92 - -
Amo18g1321 441 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1321 Amo-Chr18 23659277 23661744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1321 60 441 Receptor kinase-like Gene Family AT4G23140 49.223 1.60e-128 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1321 PK_Tyr_Ser-Thr 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1321 - - ahf:112769120 796.964