Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1319 ATGATAATCATTGCTTCATGGTACATGCTTAGGAAAAAAACAGCATCAAAAGCATTGGAACATTTAAGGATTGATGAGCTTGTTACTCATCACACCAATGTACAAAAGGAAGATATGGGGCTTCCATTATTTGATCTATCAACAATAGCAATGGCCACTAATAATTTCTCCCCCAACAATAAACTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGTATATTAGAAGATGGACAGCAAATTGCTGTCAAGAGGCTTTCAAGTAGTTCTGGCCAGGGTTTAAATGAATTCAAAACCGAAGTAAAGCTAATAGCTAGACTTCAACACCGTAATCTTGTAAAGCTTTTCGGATGTTGCATTCAAGAAGAGGAGAAATTACTAATATACGAATACATGCCTAATAAAAGCTTGGACTATTTTATTTTTGGTTTGTATCCATTAAAATACTTTTGTTAG 456 0.3509 MIIIASWYMLRKKTASKALEHLRIDELVTHHTNVQKEDMGLPLFDLSTIAMATNNFSPNNKLGEGGFGPVYKGILEDGQQIAVKRLSSSSGQGLNEFKTEVKLIARLQHRNLVKLFGCCIQEEEKLLIYEYMPNKSLDYFIFGLYPLKYFC* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1319 151 Gene3D Phosphorylase Kinase; domain 1 13 131 - -
Amo18g1319 151 Pfam Protein tyrosine and serine/threonine kinase 59 141 IPR001245 GO:0004672|GO:0006468
Amo18g1319 151 SUPERFAMILY Protein kinase-like (PK-like) 31 145 IPR011009 -
Amo18g1319 151 ProSiteProfiles Protein kinase domain profile. 56 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1319 151 PANTHER - 25 145 - -
Amo18g1319 151 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1319 Amo-Chr18 23645064 23645775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1319 44 142 Receptor kinase-like Gene Family AT4G04500 66.667 2.00e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1319 PK_Tyr_Ser-Thr 3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1319 - - ahf:112769686 252.677