Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1314 ATGGAAATAATTCTTCCTCTTCTTCTTCTTCTTCTTGTTCCGTATACCTACATGTCTGTGGCAGCAGCTTCTGATTCTTCTTCTTCTTCTGAGTTAAATAACAATGATAGCAGCATATGTGATTACACTAGAATGTGCGGACCAAATGGGAACTGCGACCTTGATGAGGCACAAACTTGTGTGTGCTTGGATGGTTTCACACCAAAGTCCCCAACTGATTTTGCTTACTTGAACTTTAGACAGGGATGTGTAAGAAACAAAGCTTTGAATTGTAGCACTGATGTGTTTGTTAGGCATTCTTCGTTTAAAGAACCAAGTGGTGGTTATTCACTGTCCAACCAACAGGATTGCTTGGGAAAATGCAAGAGCGATTGTTCTTGTATGGCGTATAAAGTAATTGTCGGTGGATGCAAATTGTGGAACGGTGATTTGTTTGATGTTAGGTTGCTCAAACAGGGCGGACAAGATCTTTATATTCGAATGTCAGCTTCAGAGGAACAAGGGGAATCAGAGGCAGGTGGGAAAAAACAGGGGCGAAATGAGGGAATGGTGGTAGGAATAGTTGTGGGGAGCAGTGTTGTGATTTCCATGATAATCATCGCTTCATGGTACATGTTCAGGGAAAGAACTGCTTCAAAAGCATTGGAACATGTAAGGATTAACGAGATCGTTACTCATGACACCAATGTACAAATACTACAAATGGAAGACATGGGCCTTCCTTTGTTTGATCTGTCAAGAATAATTGTGGCCACTGATAATTTCTCCCCCATCAATAAGCTTGGAGAAGGTGGTTTTGGATCTGTTTACAAGGGTATATTAAATGATGGACAACAAATTGCTGTAAAGAGGCTTTCAAGTAGTTCTGGACAAGGTCTAAATGAATTCAAAACCGAAGTAAAGCTAATAGCTAAACTTCAACACCGTAATCTTGTAAAGCTTTTTGGATGTTGCATCCAAGAGGAGGAGAAATTACTGATATATGAATACATGCCTAATAAAAGCTTGGACTATTTTATTTTTGATCAAGTGCGAAGGAGTATGTTAGATTGGTCTAAGCGCTTTAATATTATTAGCGGAATCGCTAAAGGCTTATTGTATCTTCATCAAGATTCAAGATTGAGAATTATACATAGAGATATTAAAACGAGTAATATTTTATTGGGCAGTAAGATGGAACCCAAAATATCAGACTTTGGTTTAGCTAGAAGCTTTGAAAATGGTCAAAGTAAAGGAAATACAAATAGAGTTGTTGGAACTTTTGGATATATGGCTCCAGAATATGCTGTTAATGGACACTTTTCGATAAAATCTGACGTCTTTAGCTTTGGTATTTTATTACTTGAAATTGTATCCGGGAAGAGAAATAGAAGATTATATTGTCCAAGTGACAATGATGAAAGCTTGTATGGAAACGCATGGGATTTATGGAAGCAAGGAAGGTCACTGGAGCTTGTGGATGAATGCCTCAAAGATTCATGGAATTTGAGTGAAGTACAACGTTGTATTCATATTGGCCTCCTATGTGCACAGCAAAATCCCCATGATAGGCCAATTATGTCTTATGTGGTTTTAATGTTAGGAAGTGAAATTGATTTGCCTCAACCCAAAGCTCCTAAATTTTTTATTTGTGATCCTTTTGATGGATCAAGTACCTCCATTAGTAAAAACGAATTAAGCATTACAGAGATGGAAGCTCGATAG 1704 0.3791 MEIILPLLLLLLVPYTYMSVAAASDSSSSSELNNNDSSICDYTRMCGPNGNCDLDEAQTCVCLDGFTPKSPTDFAYLNFRQGCVRNKALNCSTDVFVRHSSFKEPSGGYSLSNQQDCLGKCKSDCSCMAYKVIVGGCKLWNGDLFDVRLLKQGGQDLYIRMSASEEQGESEAGGKKQGRNEGMVVGIVVGSSVVISMIIIASWYMFRERTASKALEHVRINEIVTHDTNVQILQMEDMGLPLFDLSRIIVATDNFSPINKLGEGGFGSVYKGILNDGQQIAVKRLSSSSGQGLNEFKTEVKLIAKLQHRNLVKLFGCCIQEEEKLLIYEYMPNKSLDYFIFDQVRRSMLDWSKRFNIISGIAKGLLYLHQDSRLRIIHRDIKTSNILLGSKMEPKISDFGLARSFENGQSKGNTNRVVGTFGYMAPEYAVNGHFSIKSDVFSFGILLLEIVSGKRNRRLYCPSDNDESLYGNAWDLWKQGRSLELVDECLKDSWNLSEVQRCIHIGLLCAQQNPHDRPIMSYVVLMLGSEIDLPQPKAPKFFICDPFDGSSTSISKNELSITEMEAR* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1314 567 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 24 560 - -
Amo18g1314 567 Gene3D Transferase(Phosphotransferase) domain 1 331 535 - -
Amo18g1314 567 Pfam S-locus glycoprotein domain 34 70 IPR000858 GO:0048544
Amo18g1314 567 ProSiteProfiles Protein kinase domain profile. 255 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1314 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Amo18g1314 567 ProSiteProfiles PAN/Apple domain profile. 91 162 IPR003609 -
Amo18g1314 567 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 560 - -
Amo18g1314 567 Pfam PAN-like domain 91 147 IPR003609 -
Amo18g1314 567 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Amo18g1314 567 SMART serkin_6 255 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1314 567 CDD STKc_IRAK 261 527 - -
Amo18g1314 567 Gene3D Phosphorylase Kinase; domain 1 215 330 - -
Amo18g1314 567 CDD PAN_AP_plant 89 160 - -
Amo18g1314 567 SUPERFAMILY Protein kinase-like (PK-like) 240 547 IPR011009 -
Amo18g1314 567 Pfam Protein tyrosine and serine/threonine kinase 259 524 IPR001245 GO:0004672|GO:0006468
Amo18g1314 567 SMART ntp_6 91 161 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1314 Amo-Chr18 23567077 23569838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1314 177 542 Receptor kinase-like Gene Family AT4G23190 50.135 1.11e-125 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1314 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1314 - - aip:107610641 780.4