Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1309 ATGAATCCAAAGATGTCAGACTTTGGTTTAGCTCGAATTTTAAAAAGAGACCAGAGCACAAAAAATACACGTCGCATTTGGATACATAGACTAGAATATGTAATAGATGGAAACTTCTCGTTAAAATCAGACGTCTTCAGTTTTGGTATTCTGTTGTTGGAGATAGCATGGAATTTGTGGATGGAGGGAAGGCCTTTAGACTTGATAAGTGAAGACCTAAAAGAATCTTACAATGGTTCTGAAGCCCTGCGATGCATTCATATTAGTTTTCTGTGTCTTCAACAGCATCCACATGACAGGCCAACCATGTCATCTGTGGTTATGATGTTAGGCAGTCAAATTTATTTGCCAAAACCAAAACAACCAGCTCTATTTATTGGACAACATTCTTCATTAAATCAGAGTAGTTTACCTTCCGTTAATGAATTAAGTATGTCCAGTTTAAAACCGCGTTAA 456 0.3684 MNPKMSDFGLARILKRDQSTKNTRRIWIHRLEYVIDGNFSLKSDVFSFGILLLEIAWNLWMEGRPLDLISEDLKESYNGSEALRCIHISFLCLQQHPHDRPTMSSVVMMLGSQIYLPKPKQPALFIGQHSSLNQSSLPSVNELSMSSLKPR* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1309 151 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 144 - -
Amo18g1309 151 Pfam Protein tyrosine and serine/threonine kinase 4 110 IPR001245 GO:0004672|GO:0006468
Amo18g1309 151 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1309 151 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 144 - -
Amo18g1309 151 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Amo18g1309 151 SUPERFAMILY Protein kinase-like (PK-like) 2 142 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1309 Amo-Chr18 23432814 23433542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1309 1 151 Receptor kinase-like Gene Family AT4G11530 39.362 3.75e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1309 PK_Tyr_Ser-Thr 7.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1309 - - ahf:114924040 209.149