Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1301 ATGAGAAACTGCTATTCAAAGAATGTTGCTCTGTGTAAAACCGAGAAACCTATTTTCTCTCTTGCGAAGTCAATTTCCTCCACTAAAGAAAAATTCAACAGTGTACTGCAAAGTGCATTATGGAGATATCTATCTGAACAAGTTATGGTATGCTATTTAAGCATATGGATGCACCTTGCTTTTCATAATGAAGGAAAAGTATTTGGAATCAAGAGCTCTCTCCGCCTCCCCACCGCTACCTACTCCTCCGATGGCTTCCACTTCTATTTTGTAGCAGTGAACATAACATTCCGAAACATAGCAGGGCCAAGCAAGCACCAAGCAGTTGTCCTTAGAAGCGGAGCCGACTTATCAGCCTTCTACATGTGCAGCTTCGAGGGCTACCAAGACACACTCTACGCCCATTCCATGCGTCAATTCTACAGCGACTGCCACATTTATGGCACCGTTGATTTTATTTTCGGTAACGCCGCCGTAGTCTTCCAAAATTGCAACATCTTCCCCCGCCTCCCTATGACCGGCCAGTTCAACTCAATTACCGCCCAAGGCAGAACCGATCCCAACCAAAATACCGGAATCTCCATACACAACGCAACGATTCGACCCGCTGACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTATCTTGGTAGGCCGTGGAAGCAATACTCGAGGACGGTTTTATCGAAAAATATTAAAAAAACATTCATTTAA 717 0.4491 MRNCYSKNVALCKTEKPIFSLAKSISSTKEKFNSVLQSALWRYLSEQVMVCYLSIWMHLAFHNEGKVFGIKSSLRLPTATYSSDGFHFYFVAVNITFRNIAGPSKHQAVVLRSGADLSAFYMCSFEGYQDTLYAHSMRQFYSDCHIYGTVDFIFGNAAVVFQNCNIFPRLPMTGQFNSITAQGRTDPNQNTGISIHNATIRPADDLAPRVGVVKTYLGRPWKQYSRTVLSKNIKKTFI* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1301 238 Gene3D - 63 237 IPR012334 -
Amo18g1301 238 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 80 232 - -
Amo18g1301 238 Pfam Pectinesterase 77 232 IPR000070 GO:0030599|GO:0042545
Amo18g1301 238 ProSitePatterns Pectinesterase signature 2. 146 155 IPR033131 -
Amo18g1301 238 SUPERFAMILY Pectin lyase-like 89 233 IPR011050 -
Amo18g1301 238 PANTHER PECTINESTERASE 80 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1301 Amo-Chr18 23311433 23313186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1301 90 229 Carbohydrate Esterase AT4G02330 77.857 1.23e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1301 K01051 - gmx:100813051 254.603