Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1272 CCCAAATTCACCATTTCAATTTTCATCCACCCTTATTTTACCCCTGAATTCACCTCGCATTCTTCAACCCTCCTTCTCCATCACTGCAGTCACTCCGCTGCTTCCGTCGCATCGCTGCTGCCGTCACTCCGCTGCTGCCGTTGCACCGCTGCTGCCATCGCTTCGTCTCTTTGCACCGTTGTTGTTGCTGCTCAATCAAAATTAAAAACAAGTTCGCAGGGAAAAGTGGAGCCAAAATTGTTTGTATATGCTACTATGAGCAGGAAAACAACTGTGGCTTTGTGTTTTGTGATCACAAAGAGAATGGCATCCACTAATGAGACTGAAAATCTGGGTGAGAGTGATACTGTGAAGAACCTTAAACATGTTGAGAGGAAGCTTCTCAGATGCAATGTTCCTGTTGATGAGCTTCCTGAAGTGCTTGATAATCTGGACCTGGTACTATCAACAGTCAATCAATTACCAAGTGAGCCAATTCAGGAAGCACTTGTACCTTCCATGAAAGCATTGATTTCTGATGAACTTCTAAGGCACACAGATGAGGATGTTAAGATTTCGGTTACATCTTGCATTGCTGAGATTACAAGAATTACAGCCCCGGATACCCCTTACGACGATGAACAGATGAAGATTGAGGTCTCCAAGATGCATTTGGAAAGTGGGGATATTGGGACACCAAATGGGGCATTGGAAGAAGCTAAGGCGTTGAATTTAAGGATGAAGCGTAGTTGGAACCTAAGCAGCAAAGATATGTTGTTTAGAGCTAATAAGATTGATCTCAAGAGTTTGGATGATGAGCTAGAAAAGCACCTTACAAGGGTTCTGTCTAGACATATTGATGCCAAAAGGCCTAAATAA 858 0.4336 PKFTISIFIHPYFTPEFTSHSSTLLLHHCSHSAASVASLLPSLRCCRCTAAAIASSLCTVVVAAQSKLKTSSQGKVEPKLFVYATMSRKTTVALCFVITKRMASTNETENLGESDTVKNLKHVERKLLRCNVPVDELPEVLDNLDLVLSTVNQLPSEPIQEALVPSMKALISDELLRHTDEDVKISVTSCIAEITRITAPDTPYDDEQMKIEVSKMHLESGDIGTPNGALEEAKALNLRMKRSWNLSSKDMLFRANKIDLKSLDDELEKHLTRVLSRHIDAKRPK* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1272 285 Pfam Sister chromatid cohesion protein PDS5 protein 135 210 - -
Amo18g1272 285 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 118 210 IPR039776 GO:0007064
Amo18g1272 285 PANTHER TRANSCRIPTIONAL REGULATOR 118 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1272 Amo-Chr18 22566577 22570163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1272 237 285 MAP Kinase Kinase Kinase AT3G22750 62.000 2.41e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1272 - - aip:107612627 392.504