Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1254 ATGATGGTGGATACGGGTTCTGTGTTAAGAAGTGTTGGTTCCCTTGTGAATATGATGCCAGAAAAAGATGATGATGGCCGGTTTGCAAGTGGAGGGTGGAAAAGTAAGGATGGAAGGCTTAGCTGTGGGTATTCAAGCTTTAGATGGAAGAGAGTAAGGATGGAGGATTTTTATGATATTAAAACATTGAAGTTTGGTGGTCATTTAGTATGCTTATTTGGAATATTTGATGGTCATGGTAGTTCTCATGCTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAATTTTCTTTACTGGTGCCAAATTGGCTATAAGTGA 336 0.3869 MMVDTGSVLRSVGSLVNMMPEKDDDGRFASGGWKSKDGRLSCGYSSFRWKRVRMEDFYDIKTLKFGGHLVCLFGIFDGHGSSHAAEYLKEHLFDNLMKHPNFLYWCQIGYK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1254 111 PANTHER ALPHABET, ISOFORM E-RELATED 9 103 - -
Amo18g1254 111 Gene3D - 33 107 IPR036457 -
Amo18g1254 111 SUPERFAMILY PP2C-like 38 102 IPR036457 -
Amo18g1254 111 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Amo18g1254 111 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 9 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1254 Amo-Chr18 22245742 22246077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1254 1 103 PP2C-type Phosphatase Gene Family AT5G53140 66.990 4.36e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1254 K17506 - gmx:100805795 183.341