Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1247 ATGATTTTCAAGACACTAGAAGAAGCTGGAAAGAATACGACTCGGGACGGAGACAAGATTAAGAATCAACTAATTGTATGCTCTAGAGAGGGGAGGTGGAAATCAAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCAGCCAGAATTTACGTACACATAATGAAAGATGTTGGTCTTTGGACAATTTCCAAAGTTGTTTTGAATCACTCACATCCTTGTTGTGCAGACCAGGCTGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTTGTGTGTCGCACCATCGAAGCCCACGAGGAAGCCGGAATCAGACCGAGCAAAACTTACCAATCATTTGTGGCAGCAGCTGGCAGCCACCGTGAACTAGCATTCACTGTTTTCGGTTCACCAGACCTTATAGTTTCGGTTTGGTATGCGTTGTTGTACGAGGATCGCCTGATGCACCACTATTTTATGATATATTTTGGACTGGATTAA 495 0.4343 MIFKTLEEAGKNTTRDGDKIKNQLIVCSREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGLWTISKVVLNHSHPCCADQAEMLKQHRELSMFVCRTIEAHEEAGIRPSKTYQSFVAAAGSHRELAFTVFGSPDLIVSVWYALLYEDRLMHHYFMIYFGLD* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1247 164 Pfam FAR1 DNA-binding domain 4 79 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1247 Amo-Chr18 22078389 22079726 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g1247 FAR1 2.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1247 - - aip:107646405 238.039