Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1215 GCGACAACAAACTGTACTATGATGGACCAAATCTATGGTGTTCTCAAACTTAGGATTCAGAGAGGCATTAATCTCGCAATTCGCGATTTGCGTTCTAGTGATCCTTATGTTGTTGTCAGCATGGGTACTCAGAAAGTTTTCGACAAAGACATGTTCTCAGCAGATGATGAAATGGGTGAAGCAGTTATAGATATAAAGCCATATGTTAAGTGCTGGAACAAAGGATTGGAAAAACTCCCAGATGGTTGTGTAGTGAAAAGAATTCAGCCAAATGAAAATAACTATCTTGCAGAAGAGAGTCCCTGTATTTGGCACAATGGGACTATAATCCAACGTATGCTCTTAAAATTGAGAAATGTCGAGTGTGGTGAATTACTCTGTGAACTTGAATGGCTTAGTGTACTAGGTTCTATGGGCTTATTAGAGCTACAACAATTACATGCTTAA 447 0.387 ATTNCTMMDQIYGVLKLRIQRGINLAIRDLRSSDPYVVVSMGTQKVFDKDMFSADDEMGEAVIDIKPYVKCWNKGLEKLPDGCVVKRIQPNENNYLAEESPCIWHNGTIIQRMLLKLRNVECGELLCELEWLSVLGSMGLLELQQLHA* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1215 148 Pfam C2 domain 14 45 IPR000008 -
Amo18g1215 148 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 45 136 - -
Amo18g1215 148 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 8 46 - -
Amo18g1215 148 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 132 IPR035892 -
Amo18g1215 148 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 8 46 IPR044562 -
Amo18g1215 148 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 45 136 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1215 Amo-Chr18 21179466 21180653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1215 23 140 C2H2 Transcription Factor Family AT1G70790 46.667 2.30e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1215 - - ahf:112769638 262.692