Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1196 ATGGAAGTTGCTAAAAGGAAAGCAGCTTCCACGTACACAACCCTACTCTTGATATTCCTGTTTCTCTTTTTGAGCTTTGGTCCTTCTCAAGGACAAAATGCAGCCGGTGCTGACGCCGGCAAAACCAAGCCGGCGGCATTGGCAGACGACGAGACCAATTTAGATAATACAGCCGCGGAAGCCAAGATTGGCAAACCAGCCAAGGCTGCAGTTGTGGGGGCGGCTAACAAGCCCGCCGCGGCTGATGACGGGGAGGCCGATATCGACGATAAAGCCGCGGCTGACATCGCGGCAGCCAAGGCAAACAATAATCCCACCACGGCTTTAGTCGCGGTTGAGGATGACAAGCCAGCCGCAGCTGGAAAAGCAGCAGCTGAGGCTGCAGATGAAGCAGACGGCGCCGTGGCTGGAAAAGCAGCAGCTGCGGCTACAGATGATGCAGACGGGGCCGCCGTCAAAAAGGCCAAGCCTGTCAAGGGGGCCGTCGTGACCACAGCTGCACCAGCGACCGACGTTGAGGTAATTCCAGCTCCTCCGCCTCCACCAGCAGAACTGCAGGTCTGCAATGGCGTGTTCCTAACATACACGCTGATATCACGCGAGAAGGAATACCCATTCGTGAAGAACAAGTCAAATCAAGCATATGCCTTCACGTCCCAAGCCACGATTACAAACGTCGGTGACGAGGAGGTGAAGGGCTGGAGGATGTACATTGGGTTCCAACACCGAGAAATATTGGTTTCCATGGACGGCGCCGTCCCCATCGACGCCGAGGACTTCCCGGCTGCCGTAGGGAACGGCACCACGATCGCCGGAAACCCAATGGTGGATCTAAAGACTGCGATCTTGACGGCTAATGATTTTACACAAATGTCGGTGAGAGTTGGAATGAAAGGATCACAGTTCGGTCTTGGTGATGGCGCCACCCCCATGCCTAAGACCATTAAGCTTATCAATAGTGGCTTCAAGTGTCCCGCCTCTTCTCGCAGAGGGTCAACAATGATAGTGTGTTGTAGAAAAGACCCTAAAGCGAAGGCATTGGCACTTAAGAAGACAAAGTACCCATCACGTGGCAAAGGGGATTTAACCATTTCATACGACGTTCTACAAGCTTACCAGACGAGCTACTACGCTGAGGTGACCATCCAAAACAACCACCCGTTGGGACGGCTGGACCACTGGAACCTCACGTGGGAATGGCAGAGGGGCGAGTTCATCTACAGCATGAAAGGTGCCTTCGCGCGCGTCAAGGACCCTTCGGAATGCTTGTATGGCCCTGCAGGCCAGTACTACAGGGACTTTGATTTCACCCAAGTCGCCAATTGCGAGAAGAGGCCCATTATCTCTGATCTTCCTTCTGAGAGAAAAGACGATGAAAAGGTGGGGAAGCTACCATGGTGCTGCAGGAATGGCACAGTGCTGTCACCTGTGATGGACAGGAACCAAGCCAGGTCAATGTTCCAGCTCCAAGTTTTCAAGATTCCACCAGATAACAACAGAACAGCACTCACACCACCCATGAAATGGAAGATCGACGGCGTCATCAACCCCCACTACAAGTGCGGCCCACCGGTCAGAGTGGACCCCGCAGAGTACCCTGACCCATCAGGTCTCCAGGCTATTCACACCGCCGTCGCAAGTTGGCACATCGTTTGCAACATGACAAAGCCACAGCCTCAGAAAACAAGGTGCTGCGTCTCATTCTCTGCATTCTACAACGAATCCGCCATCCCCTGCAACACTTGCGCTTGTGGCGGTTGTGACGGTTACCAGCAATGCAACGCAAAGGCACCACCCATGCTTATTCCACCCGACGCGCTTCTCGTTCCGTTTGTTAACAGAACCGCCAAGATGAAAGCGTGGGCCAAGATGAAGCATTTCAAGATTCCCAAACGGATGCCTTGCGGCGATAACTGTCCCGTTAGCATCAACTGGCACGTCAACTCCGACTACAAAACTGGATGGACAGCAAGGATCACGCTTTTCAACTGGGAGCGCTACGCCTTCGATGATTGGTTCACTGCTCTTCAGTTCCACAACAATTCTTTCAGAGATTTCGATGAAGTTTACTCCTTCAACGGAACCAGAATCCCAGGCCTTAGAACCGTCTTCCTTCAAGGATTTAAGGGTTTGAACTATTTGGTGGGACTCACCAACGGAAGCCGCATCGGTGACCCACACGTGCCCGGGAAGCAGCAATCCGTGCTGTCCTTCAAGAAGAAGCATTCGAAGAAATTCAACATCAGAAGAGATGCATTCCCAACGAAGGTTTACTTCAATGGTGAAGAGTGTGCACTCCCTCCAACTACTCCTTCTAATGGTTCCTCACGCATCAAGTCTTCTCCGATCAGTTTCCTTGCTGTCACCATCATCGCATTCTTGTCGTTCTTCGCCATGACCGAACGTTTATTCTGA 2415 0.5251 MEVAKRKAASTYTTLLLIFLFLFLSFGPSQGQNAAGADAGKTKPAALADDETNLDNTAAEAKIGKPAKAAVVGAANKPAAADDGEADIDDKAAADIAAAKANNNPTTALVAVEDDKPAAAGKAAAEAADEADGAVAGKAAAAATDDADGAAVKKAKPVKGAVVTTAAPATDVEVIPAPPPPPAELQVCNGVFLTYTLISREKEYPFVKNKSNQAYAFTSQATITNVGDEEVKGWRMYIGFQHREILVSMDGAVPIDAEDFPAAVGNGTTIAGNPMVDLKTAILTANDFTQMSVRVGMKGSQFGLGDGATPMPKTIKLINSGFKCPASSRRGSTMIVCCRKDPKAKALALKKTKYPSRGKGDLTISYDVLQAYQTSYYAEVTIQNNHPLGRLDHWNLTWEWQRGEFIYSMKGAFARVKDPSECLYGPAGQYYRDFDFTQVANCEKRPIISDLPSERKDDEKVGKLPWCCRNGTVLSPVMDRNQARSMFQLQVFKIPPDNNRTALTPPMKWKIDGVINPHYKCGPPVRVDPAEYPDPSGLQAIHTAVASWHIVCNMTKPQPQKTRCCVSFSAFYNESAIPCNTCACGGCDGYQQCNAKAPPMLIPPDALLVPFVNRTAKMKAWAKMKHFKIPKRMPCGDNCPVSINWHVNSDYKTGWTARITLFNWERYAFDDWFTALQFHNNSFRDFDEVYSFNGTRIPGLRTVFLQGFKGLNYLVGLTNGSRIGDPHVPGKQQSVLSFKKKHSKKFNIRRDAFPTKVYFNGEECALPPTTPSNGSSRIKSSPISFLAVTIIAFLSFFAMTERLF* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1196 804 Pfam COBRA-like protein 376 555 IPR006918 GO:0010215|GO:0031225
Amo18g1196 804 PANTHER COBRA-LIKE PROTEIN 10 179 802 - -
Amo18g1196 804 PANTHER COBRA-LIKE PROTEIN 7 179 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1196 Amo-Chr18 20714557 20717520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1196 181 804 COBRA Gene Family AT4G27110 57.006 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1196 - - ahf:112772953 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1196 18 20714557 20717520 Amo08g1389 08 22666112 22669117 hybridization