Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1182 ATGAGTATCATGTTTGTGGCAAATCTTTTAGATCAGAATATGAGTGCTTGTTTGAGTAACAACGGTGAGCATGGTGATGTGTCTCAATTGGCAGACATTGAAGATGACTCCAATGCTAAATTGGAGGTTTGTGTTAGCACTTACGTCTCAGGGAAGCCTTTTGAGGGATCCATCGACATTATTTTGAAGCTGTTGAAGAATGTTATTAGAGAGCCTGAGAATGCCAAGTTTAGGAAGATCAGATTGGGCAATCCTAAAATTAAGAAGGCTGTTGTCGATATTACCAGTGGAACTGAGTTGATTTGCTTTCTTGGCTTTGAACTTAAGGATGAGAATGATGAGACTTGGACCATCATGGAGCTTCTTTTAGAGGAGCAGATAAGATTGATCAAGAAAGCAACACTGTTGCTGGAATCACAGCCGGTGCTGCAAGTATCTCCAAAGAGTGAGAATTTGGCTGCAGCTTCTGCTGACAACATAGATGCAAAGCCTGAATCCAAGCCTATCAACAGACAGTTGAAAGTCTTCTTTGCCGTTCCTAAAACTGTTGCAGCAAAAATTAAGCTGCCAGATTCCTTCTATAAACTTACAGTTGAAGAGATAGAATTGTACTTCAAGTTTGTCAGCTCTGTATTGAAACAACCAGGTTTAGAGTTTGAGCTAATGCATCCAGTAGTAATTCGACGCGGACAATCCCTCAGTTAG 705 0.4071 MSIMFVANLLDQNMSACLSNNGEHGDVSQLADIEDDSNAKLEVCVSTYVSGKPFEGSIDIILKLLKNVIREPENAKFRKIRLGNPKIKKAVVDITSGTELICFLGFELKDENDETWTIMELLLEEQIRLIKKATLLLESQPVLQVSPKSENLAAASADNIDAKPESKPINRQLKVFFAVPKTVAAKIKLPDSFYKLTVEEIELYFKFVSSVLKQPGLEFELMHPVVIRRGQSLS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1182 234 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 205 229 - -
Amo18g1182 234 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 13 201 - -
Amo18g1182 234 CDD PUB 45 139 - -
Amo18g1182 234 Gene3D - 37 138 - -
Amo18g1182 234 SUPERFAMILY PUG domain-like 49 128 IPR036339 -
Amo18g1182 234 SMART PGNneu 56 123 - -
Amo18g1182 234 Pfam PUB domain 54 127 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1182 Amo-Chr18 20469401 20475609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1182 13 202 C2H2 Transcription Factor Family AT2G01650 41.885 2.35e-45 154