Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1181 ATGGAAGATATACTTGGTCTTATCAAACTTAGGATTAAAAGGGGCATTAATCTCGCAAAACGCGATACTTTTTCTAGTGACCCTTATGTTGTTGTCAAAATGGAAGAACAGAAGTTGAAAACTGCGTTCATACGTAAAAATATTAATCCAGAATGGAATGAAGAATTGACTCTTTATGTTAAGGATGTTGCAACTCCAATAACTGTGCAAGTTTATGACAAAGACACATTCACTGCAGACGATGAAATGGGAGATGCATTTATAGACTTAAGGCCGTATATCGGGTGCTATTATTTGATGGGGTTAGAGAGATTGCCAGATGGATGTATGGTAAAGAAAATTCAACCAAATAAGACTAACTGTCTTGCTGAAGAGAGCACATGCTTTTGGCGCAATGGCTGTATAGTCCAAAATATGATACTAAGATTGAAAAATGTTGAGTGCGGCGAAATAGAGTGTGAGATTGAGTGGCGTGATATTCCTGGTTGTAAAGGTTTATCTGGACTAAGATCTTGA 516 0.3721 MEDILGLIKLRIKRGINLAKRDTFSSDPYVVVKMEEQKLKTAFIRKNINPEWNEELTLYVKDVATPITVQVYDKDTFTADDEMGDAFIDLRPYIGCYYLMGLERLPDGCMVKKIQPNKTNCLAEESTCFWRNGCIVQNMILRLKNVECGEIECEIEWRDIPGCKGLSGLRS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1181 171 Pfam C2 domain 7 92 IPR000008 -
Amo18g1181 171 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Amo18g1181 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 164 - -
Amo18g1181 171 Gene3D C2 domain 4 162 IPR035892 -
Amo18g1181 171 PRINTS C2 domain signature 22 34 IPR000008 -
Amo18g1181 171 PRINTS C2 domain signature 46 59 IPR000008 -
Amo18g1181 171 PRINTS C2 domain signature 67 75 IPR000008 -
Amo18g1181 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Amo18g1181 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Amo18g1181 171 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1181 Amo-Chr18 20463914 20464635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1181 38 167 C2H2 Transcription Factor Family AT1G70790 58.015 3.39e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1181 - - zju:107429323 236.884