Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1178 ATGGAACAATTAGAACAATTGGCTATTAATCCTAAATTACTTGGAAGAGGAAGCAGAATGATCATAACCACTAGGGATGAACATATTCTTAAAAGTTATGGAGTAGATGCAATTCACAAGGTTTCGTTATTGAATTCCCATGATGCGTCGGATCTTTTTTTAAGAAAGGCCTTCAAAAGTGACCGTCCTAGTAGCAGCACTTGCATGGAGTTGACTCCTAGTATATTGGAATATGCTCAAGGTCTTCCATTAGCAATCAAAGTAGTGGGTTCTTTCTTGTACAATAGGAATGCTTCCCAATGGAGAGATTATTTTGAAAGACTGAAGAAACATCCAGACAAAAAAGTTACTGATGTGCTTCAAATAAGTTTTGACACACTGCAAAAAGAAGACAAAGAAATATTTTTGCACATTGCTTGCTTTTTCATAGGGCAGAGGGAAGAGTATGTAAAGCGAATTCTAGATGTTTGTGGACTACACCCTCACATTGGAATTCAAGTTCTAAAGGAGAGATCACTCATAACTATTAAGAACCAAGAGTTTCATATGCATGACATGTTTCAAGAATTGGGGAAGAAACTTGTTCGAGAAAGATATCCTGAAGAGCCAGCATTATGGAGCAGAGTATGGCTCTATAGCGATTTTGAAAGTGCTTTGATGTCAGCTGAGACGGGAACAAACAATGTTAAAGCCATAGTCTTGGATCAGAAAAAGGAGATGCCCGAGTCCAGGCAGTTGAGGATAGAAGGATTGTCAAAATTGAGGGATCTTAAATTGCTTATATTATACCAAAAGAACTTTTTAGGAAGCCTCGATTCTCTTTCCCCTAATCTACAGTATCTTGCTTGGCATGGCTATCCTTTCGCTTCTTTGCCATCGTTTCAACCTTATAGTAGGCTTGTTGAACTGAACCTACCTTATAGCAACGTCAAACGACTCTGGGAAGGCAACAGGAATATCCCACACTTGGAAAAGATGGACTTGAGCTACTCAAAGGATCTCATAGAGACACCAAATTTTGAATGGAACCCAAACCTTAAGCGACTAGATTTTACAGGATGCACAAACTTGACGCATGTCCATCCCTCAATTGGACTTCTTAAGCAGCTTGGATACTTGAGTTTGCAAAACTGTAGCAGTTTGTTGAACCTCAATCTTGGCGATGATTGTAATTTAAGTTCTCTGAGAGTTCTACGCCTTTCTGGCTGCACGAACCTTGGGAAGACCCCAGATTTCACAGGGCTTTCAAATCTTGAGTACCTTGATTTTGGACATTGTACAAATTTAACTACAGTTCATGAATCTATTGGTGCTCTTGCAATGTTGAAGTTCTTGAGTTTGAGGAGCTGCAGAAATATTGTTGATATCCCCAATGAAGTGAACAATATGATATCTCTTCAGACTCTAGATTTAAGAGAGTGTAAACTACTGATGTCTCCCCTTGGACAGATTTCTATGTCTTCCTCTTATCTAGGATGTTTGATATCTCTGGACCTTGGCTCATGCAATTTAATAGAAACTATTCCTGATTCTATTGGTGATTTGAGTTGCTTAGAAAGATTAAACTTGGAGGGAACTGTCCTAAGACGTCTACCTGGTACCATCAAGAAGCTTTCGAGGCTGGCATACTTGAATTTGGCATGTTGCGATTATCTTCAAGGATTACATGAGCTCCCATTTGATAGTGCACCATCAGGGGGAAGGTATTTTCAAACGGTATCTGCATCTCGTAACCATAGGTCAGGATTGTATGTTGTAAACAAATACAATATGCTTAGGATGAAATTATTTGATTGCATGCTGGCTGCTCTCTCATGGTTTGCAAGACTTGTTGAGCAACCTTGTCATTTCCGATGTGGGTTTGACATCATTATTCCTGGAAATAAGAGTGGTGGAATTCCAGGATGGTATTTCATTCATCAGTTTAAAGCTGGGTCAGCTGTAAGGGTAGTGGATTATGATGATGCAGATGACAACTGGCTTGGCGTTTCATTTTATGTTACATCTCAGTATGTTCTAGATAATTGTACTCCACCTGGACAGCTACGGCATCATTTTTATCTTTCTTTTGAAAGTGAGCACACAGAAGAACATTTTGATATGCCTTCTATAGTCGAACACCATCTGCATTCTGTACCTGGGGTAACACATGCTTGGATAATCTATGTCTCTCGGGTGCATTGCCATTTTGTGAAAACTGGAGCCCGTATAAGATTTAAAGCCTGCCAGGGATTGAAGTTGCAGAAATGGGGGTTTCGCATGGTGTTCAAACAAGATATAGAGGAACTGAAGAGGAGGTTAAAAAGTAAGGATATTAAAAAGCACAGTCCTATCTTTGATTCTTCCAGATTGGTCATTGAGACTGAGTATGTTGATGAAGACCCAAGTAGCAGTTCGGAGTCCAAGATCATGCTTCCTTATAATTGGTTGGTTACCGACGAAGAAGAAAATGAGAAGATGGAGGCAAAGGCCAAAGAAGATGATCTCTCTAATTTGGGCCTTATATAG 2508 0.3959 MEQLEQLAINPKLLGRGSRMIITTRDEHILKSYGVDAIHKVSLLNSHDASDLFLRKAFKSDRPSSSTCMELTPSILEYAQGLPLAIKVVGSFLYNRNASQWRDYFERLKKHPDKKVTDVLQISFDTLQKEDKEIFLHIACFFIGQREEYVKRILDVCGLHPHIGIQVLKERSLITIKNQEFHMHDMFQELGKKLVRERYPEEPALWSRVWLYSDFESALMSAETGTNNVKAIVLDQKKEMPESRQLRIEGLSKLRDLKLLILYQKNFLGSLDSLSPNLQYLAWHGYPFASLPSFQPYSRLVELNLPYSNVKRLWEGNRNIPHLEKMDLSYSKDLIETPNFEWNPNLKRLDFTGCTNLTHVHPSIGLLKQLGYLSLQNCSSLLNLNLGDDCNLSSLRVLRLSGCTNLGKTPDFTGLSNLEYLDFGHCTNLTTVHESIGALAMLKFLSLRSCRNIVDIPNEVNNMISLQTLDLRECKLLMSPLGQISMSSSYLGCLISLDLGSCNLIETIPDSIGDLSCLERLNLEGTVLRRLPGTIKKLSRLAYLNLACCDYLQGLHELPFDSAPSGGRYFQTVSASRNHRSGLYVVNKYNMLRMKLFDCMLAALSWFARLVEQPCHFRCGFDIIIPGNKSGGIPGWYFIHQFKAGSAVRVVDYDDADDNWLGVSFYVTSQYVLDNCTPPGQLRHHFYLSFESEHTEEHFDMPSIVEHHLHSVPGVTHAWIIYVSRVHCHFVKTGARIRFKACQGLKLQKWGFRMVFKQDIEELKRRLKSKDIKKHSPIFDSSRLVIETEYVDEDPSSSSESKIMLPYNWLVTDEEENEKMEAKAKEDDLSNLGLI* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1178 835 Pfam NB-ARC domain 6 114 IPR002182 GO:0043531
Amo18g1178 835 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 406 IPR044974 GO:0006952
Amo18g1178 835 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 486 778 IPR044974 GO:0006952
Amo18g1178 835 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 405 479 IPR044974 GO:0006952
Amo18g1178 835 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 406 - -
Amo18g1178 835 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 486 778 - -
Amo18g1178 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 138 IPR027417 -
Amo18g1178 835 Gene3D Ribonuclease Inhibitor 387 480 IPR032675 -
Amo18g1178 835 Gene3D Ribonuclease Inhibitor 481 600 IPR032675 -
Amo18g1178 835 Gene3D Ribonuclease Inhibitor 238 386 IPR032675 -
Amo18g1178 835 Coils Coil 812 832 - -
Amo18g1178 835 SUPERFAMILY L domain-like 183 585 - -
Amo18g1178 835 Gene3D - 43 128 IPR042197 -
Amo18g1178 835 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 405 479 - -
Amo18g1178 835 Pfam Leucine Rich Repeat 300 317 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1178 Amo-Chr18 20379474 20385601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1178 14 564 WRKY Transcription Factor Family AT5G45050 28.523 4.54e-55 204