Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1177 ATGCCAAATTTTGAATGTTGCACAAATCTTAAGCGATTAGATCTTTCAGGATGCACAAAACTACAGCAGATCCACCCTTCAATCGGATTTCTTACACGACTTGTCTACTTGAATTTGAGGGACTGCAGTAGTTTGGTTAGCCTCAACTTTGGTGATGATAAATGCAAGTTAAGTTCTCTGATAGTTCTACACCTCTCAGGCTGCACAAAATTGAAAAGTACGCCAGATTTTTCAGGGCTCTTAAATCTAGAATATCTTGATCTTGAACAATGTACAAGTTTGGTTTATATGCATAACTCTATTTGGGCCCTTGAAAAACTTAGATCTTTGAGTTTGAGAGATAATATAAACCTTAAGGGGGGACCTAATGGCATGGCTTGTATGACATCTCTTCATACTCTAGATTTTCAAGGCTGCTCAAACCTTTCAGAACTTCGGCTTGTTATTAGCAGACATGAAACAGTCAGACATTACTCAACTCTTCGCGAGGCTATCCATTCACAGGTTCTGGAAGCTTTAACATTTCTGGATCTTGGCTTTTGCAATCTATCAAAGGTTCCTGAGGATATTGGGGAATTAAAGGGGTGTGGCTTTGACATTGTTATCCCCGGGAATGAAATTCCATCGTGGTATTTCAATCATCAATTTGAGGGCGGAACAGCAATAAGGATAGTGGACACAGATGTGGATGACAATTGCATTGGCTTTACCTTTTGTGTAGCATTTTGTGTAACCAATCCTTCGGCAGTTTCTAGTTCTTCACATAATCGGCTGTCCACATCGTTGCCAAGTCCATTATATCTTTCCTTTGAAAGTGAACAAGCAGAAGAAATCTTCTGTATGCCATGCCATTTAGACTGCAACCCTCAGTTTAAAACTGCGAGGAAGCAAAATTTTGATCATGTCTGGATTATCTATATTTCTCGGCCACACTGCCATTTTGTGAAAACAGGAGCCAATATCACATTTAAAGCCTGCCCAGGGATTGAAATGAAGAACTGGGGGCTGCAAATGGTATTCAAGCAACATATAGAGGCAATTAAAAGAAACTTGAAACGCCAAAGTAAGGTTGACCCTTTTTATTATCTTATGGATGACCCTGAAATCCAACTTCATGATTATAGGTTGGTTATTGAGGATGTGCATGAAAGCTACAACACTAGCATCGGGCCAAAAATCCAGCTTCCCTACAATTGGTATGTAACTGATGAAGAGGAAAGGGAAAATATGGAAGCCAAAGGCAAAGAAATTAATCTCGCTAATATTGGCCTTTAA 1275 0.3945 MPNFECCTNLKRLDLSGCTKLQQIHPSIGFLTRLVYLNLRDCSSLVSLNFGDDKCKLSSLIVLHLSGCTKLKSTPDFSGLLNLEYLDLEQCTSLVYMHNSIWALEKLRSLSLRDNINLKGGPNGMACMTSLHTLDFQGCSNLSELRLVISRHETVRHYSTLREAIHSQVLEALTFLDLGFCNLSKVPEDIGELKGCGFDIVIPGNEIPSWYFNHQFEGGTAIRIVDTDVDDNCIGFTFCVAFCVTNPSAVSSSSHNRLSTSLPSPLYLSFESEQAEEIFCMPCHLDCNPQFKTARKQNFDHVWIIYISRPHCHFVKTGANITFKACPGIEMKNWGLQMVFKQHIEAIKRNLKRQSKVDPFYYLMDDPEIQLHDYRLVIEDVHESYNTSIGPKIQLPYNWYVTDEEERENMEAKGKEINLANIGL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1177 424 SUPERFAMILY RNI-like 2 193 - -
Amo18g1177 424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71 270 IPR044974 GO:0006952
Amo18g1177 424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 72 IPR044974 GO:0006952
Amo18g1177 424 Pfam C-JID domain 202 345 IPR045344 -
Amo18g1177 424 Gene3D Ribonuclease Inhibitor 79 300 IPR032675 -
Amo18g1177 424 PANTHER TMV RESISTANCE PROTEIN N-LIKE 71 270 - -
Amo18g1177 424 PANTHER TMV RESISTANCE PROTEIN N-LIKE 2 72 - -
Amo18g1177 424 Gene3D Ribonuclease Inhibitor 1 78 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1177 Amo-Chr18 20375218 20376928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1177 1 193 WRKY Transcription Factor Family AT4G12020 31.606 3.65e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1177 - - adu:110274627 451.825