Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1174 CCACGATCGGGTCTTCCGTTGAAGCATTGGATTGACGTTGGTGCGGGGGTGATTGACGCCGGTTGGGGTGATACTGTTCAACCAGTCGACGATCTCAGAAAATTGCTCGAATTCGACTCGACGGTTAACATTCTCGTTAACTTGGCCGGTGTTCTTGATAGCAAGTACTCGACCATAGCCAACATTGCAGTGGAGGATTTTGATCACATTTTCAGATACGATCTAGTGAGATTCATGAAGATAATACAAAAAGCTGGTCTCTATGCTCATCTTCGCATTGGTCCTTATGTCTGTGCTGAATGGAACTTCGAGTACAATACGTTCTCCCCCGATACGGTGAACAAGATGCCTAGAACAGATCTCGTTGAGGAGATTTTTAGACTACAAGCTGCACTGGGTGAGCAGACACAAGTTACAAAGTTTAGCCAAGAGGAGTATGAAAGGCTTCAAAATTTGGAGATGTCATCCCAGACAGCACCTTGGCCTTCTTGGACAACGATAACAAGCCACAGTCTGAGAGCAGAAGAGCTGAAAGGAAGTGTTGGGAGTGAGGAGTACACACAAGATGGAATAAAAATGGAGGTTCGGATCAAGATCCTCTACACTTCAATATGTCATACCGATCTAGCATGTTGGAAAGCTAAGAAAGCTGTGTTGAAGTTGGATTTACACAATGACAAAACCAAGCAAAAAACTATGAAAATTGTCTCTGGCATTTCAGGGGTTGAATCAGTATCTGTGGACATGAAGGAGAAGAAAATGAGTTTAATTAGTGAAAATAGCACTTATTAG 792 0.4318 PRSGLPLKHWIDVGAGVIDAGWGDTVQPVDDLRKLLEFDSTVNILVNLAGVLDSKYSTIANIAVEDFDHIFRYDLVRFMKIIQKAGLYAHLRIGPYVCAEWNFEYNTFSPDTVNKMPRTDLVEEIFRLQAALGEQTQVTKFSQEEYERLQNLEMSSQTAPWPSWTTITSHSLRAEELKGSVGSEEYTQDGIKMEVRIKILYTSICHTDLACWKAKKAVLKLDLHNDKTKQKTMKIVSGISGVESVSVDMKEKKMSLISENSTY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1174 263 SUPERFAMILY GroES-like 193 214 IPR011032 -
Amo18g1174 263 Pfam Glycosyl hydrolases family 35 72 103 IPR031330 -
Amo18g1174 263 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 104 151 - -
Amo18g1174 263 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 104 151 - -
Amo18g1174 263 Gene3D Glycosidases 63 155 - -
Amo18g1174 263 Gene3D - 211 260 - -
Amo18g1174 263 SUPERFAMILY (Trans)glycosidases 71 104 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1174 Amo-Chr18 20286528 20291757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1174 105 151 C3H Transcription Factor Family AT1G73950 68.000 4.89e-16 75.5