Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1151 ATGGATTCCAGCAACCGCATCGAAAGCAGCAGCGCCACCGCACCTCGGCGGATCTGCAAATGCGACGTGTTCATCAGTTTCAGGGGTCCCGACACCCGCAACACTTTGGTTGATCATCTCTACAATCACCTCATCCGAAAAGGCATCTTCACCTTCAAGGATGACAAGACGCTGGAGCAAGGTCAACCCATTTCATCTCAGCTCCTGCAAGCAATTAGGGATTCAAGGATTTCCATTGTTGTCTTCTCACCAGATTATGCAGCCTCCACTTGGTGTTTAGATGAAATGGCTGCTATTGTTGACTGCCAAAGAGAGTTCAATCAAGCTGTCTTCCCGGTTTTCTATGATGTGGATCCCTCTCATGTGCGCAAACAGAACGGTGTGTACCAGGAAGCTTTTATCTCCCATTCACAGAAATTCACACAAGACCCAGCAAAGGTCCAACGCTGGAAGAGTGCTATGACCACTTTGGCCAATTCTGTTGGCTGGGATGTTACAAATAAGCCAGAGTTTGGAGAGATTGAAAAAATTGTTCAGAAAATAGTGAAAACATTGAATCATAAATTCTCTGGGTTTGTTGATGACTTAATTGGGATGCAGCCTCGTGTGGAAGGATTGGAAAAGCTTCTCAAGTTAAGATCAGAGGATGATGGCTTTCGAGTTTTAGGATTATGGGGGATGGGCGGTATAGGAAAGACAACTCATGCTACGGCCTTATATGATAGAATCTCTTATCAATTTGATGCTTCTTGTTTTGTTGAGAACGTGAGCAGACTTTACAATGATGGTGGTGCTATGGCCATACAAAAACAAATTCTTCGTCAAGCTCTGGACGAAAAGAATTTAGATACTTACAGTCCTTCCGAGATATCTGGGATTATAACAAATAGGCTTCATAGTATAAAGGTCCTTGTTGTGTTGGACAATGTTGATCACCTGAAGCAATTAGAAGAATTGGCTATCAAACCTAAATTACTTTGTGAAGGGAGTAGAATAATCATAACCACGAGGGATGCGCATATTTTAAAAGTGTATGAAGCCGATGAAGTTCACAATGTTCCCCTGTTAAGTGATAAAGAAGCCCGAGAGTTGTTTGGTAGAAAAGCCTTCAAGAGAGAGGGTCCAAGCAACAATTGTGAGGAGCTGATTCCTGAGGTACTTAAATACGCTCAAAGACATCCACTAACAATTAAAGTGGTGGGTGCTTTCTTGTGTTCCCGCAATGCTGCCCAATGGAGAGATGCCTTGGATAGATTAAGGAATAATCAAGAAGACGAAATTACAAACGTGCTTCGGATTAGTTATGACGGGCTAAAATATGAGGAGCAAGAAATATTTCTACACATTGCTTGTTTTTTCAGAGGGGAGAGGGAGGACTATGTAAAGCGAATACTAGATTCTCTTGGATTATATCCTATTATTGGAATTTCAGTTATTGCGCAGAAATCACTCATAACCATTAGAAACCAAGAAATTCATATGCACGAAATGCTGCAAGAGTTGGGAAAGAAAATTGTTCGGGAGAAATATCCTCAAGAACCTGGATCATGGAGTAGGATATGGAGTTACAAGGATTTCCATCATGTCTTGATGTCAGAAACGGGAACAAATAAGATCAAAGCCATAGTTGTTGATATAAAAGAGGATATCACTGATTGCAGTCAGATGGTTGAAGGGTTGTCCAAAATGAAGGATCTCAAGCTGCTCATTGTACATCAAAAGAACAACCATTCAGAAAGTAGACTCAAATCTCTTTCTAGTTGTCTGAAGTATCTTTCATGGCATGGTTACCCTTTTCCTTCTTTGCCATCAGTGTTTCACCCTTCAGAATGTCTCGTTGAAATGAATTTGTCTGCTAGCAGTATCAAAAGCCTATGGGAAGGCCACAAGGTATTATTAGACTATTAG 1908 0.413 MDSSNRIESSSATAPRRICKCDVFISFRGPDTRNTLVDHLYNHLIRKGIFTFKDDKTLEQGQPISSQLLQAIRDSRISIVVFSPDYAASTWCLDEMAAIVDCQREFNQAVFPVFYDVDPSHVRKQNGVYQEAFISHSQKFTQDPAKVQRWKSAMTTLANSVGWDVTNKPEFGEIEKIVQKIVKTLNHKFSGFVDDLIGMQPRVEGLEKLLKLRSEDDGFRVLGLWGMGGIGKTTHATALYDRISYQFDASCFVENVSRLYNDGGAMAIQKQILRQALDEKNLDTYSPSEISGIITNRLHSIKVLVVLDNVDHLKQLEELAIKPKLLCEGSRIIITTRDAHILKVYEADEVHNVPLLSDKEARELFGRKAFKREGPSNNCEELIPEVLKYAQRHPLTIKVVGAFLCSRNAAQWRDALDRLRNNQEDEITNVLRISYDGLKYEEQEIFLHIACFFRGEREDYVKRILDSLGLYPIIGISVIAQKSLITIRNQEIHMHEMLQELGKKIVREKYPQEPGSWSRIWSYKDFHHVLMSETGTNKIKAIVVDIKEDITDCSQMVEGLSKMKDLKLLIVHQKNNHSESRLKSLSSCLKYLSWHGYPFPSLPSVFHPSECLVEMNLSASSIKSLWEGHKVLLDY* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1151 635 PRINTS Disease resistance protein signature 221 236 - -
Amo18g1151 635 PRINTS Disease resistance protein signature 297 311 - -
Amo18g1151 635 PRINTS Disease resistance protein signature 390 404 - -
Amo18g1151 635 Pfam TIR domain 22 188 IPR000157 GO:0007165
Amo18g1151 635 SMART till_3 20 160 IPR000157 GO:0007165
Amo18g1151 635 SUPERFAMILY "Winged helix" DNA-binding domain 425 530 IPR036390 -
Amo18g1151 635 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Amo18g1151 635 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 163 IPR035897 -
Amo18g1151 635 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 629 - -
Amo18g1151 635 Gene3D - 355 439 IPR042197 -
Amo18g1151 635 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 629 IPR044974 GO:0006952
Amo18g1151 635 Gene3D - 18 190 IPR035897 -
Amo18g1151 635 Pfam NB-ARC domain 208 427 IPR002182 GO:0043531
Amo18g1151 635 Gene3D - 191 351 IPR027417 -
Amo18g1151 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 449 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1151 Amo-Chr18 19851819 19854939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1151 22 631 WRKY Transcription Factor Family AT4G12020 28.201 1.30e-59 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1151 - - ahf:112707228 1265.37