Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1150 ATGCATGACATGTTACAAGAATTGGGGAAGAAACTTGTTTGGGAAAGATATCCAGAAGAGCCAGCATTATGGAGCAGATTATGGCGTTGTAGCGATTTTGAAAATGCTCTGATGTCAGCTGAGACGGGAACAAATCATGTCAAAGCCATAGTCTTAGATCAGAGAGAGGAGATGCCCGRGTGCAGTCAGTTGAGGATCAGAGGATTGTCAAAATTGAGGGATCTTAAATTGCTTATATTATACCATAAAAACTTTTTAGGAAGCCTTGATTTTCTTTCTCCTAATCTGCAGTATCTTGCTTGGCATGGCTATCCTTTCCCTTCTTTACCATCGTTTCAGCCTTATAGTAGGCTTGTTGAACTGAACCTGCCTTATAGCAATGTTAAACGACTATGGGAAGGCAACAAGAATATCCCACACTTGGAAAAGGTGGACTTGAGCTACTCAGTGGATCTCATAGAGACACCAAATTTTGAATGGAACGCAAAACTTAAGCAACTAGATTTTACAGGGTGCACAAACCTGATCCACATTCATCCCTCAATTGGACTTCTTAACCAGCTTGCATACTTGAGTTTGCAAAACTGTAGCAGTTTGTCCAACCTCAATCTTGGCGATGATTGTAATTTAAGTTCTCTTAGAGTTCTATGCCTTTCTGGCTGCACAAACCTTAATAAGAGTCCAGATTTCACAGGGCTTTCAAATCTTGAGTACCTCGATCTTGAAAATTGTACAAGTTTATCWACAGTTCATGAATCTATTGGTGCTCTTGTAATGTTAAAGTTCTTGAGTTTGAGAGGCTGTATAATTATTTCTATGCCCAAAGAAGTCAACAATSTGATATCTCTTCAAACCCTAGATTTAAGCCGCTGTCTACGACTGAGGTATCCCCTCGGACAGATTTATTCATCTTACCTAGAATCTTTGATATCTCTGGACCTTGGCACMTGCCATTTTATAGACAATATTCCTGATTCCATTGGAGTGTTGACTTGTTTAGAAAGATTAAACTTGGAGGAATGTCAGTGTAGTCATTTACCTGATACCATCAAGAAGCTTTCCAGACTGGCATATTTGAATTTGGCGGATTGCTCATATCTTGAAAGATTGCCTGAGCTCCCATTTGATAGTGCACCGTCAGGGGGAAGGTATTTTCAAACAGTATCTGCATCTCGTAACCATAGGTCGGGATTGTATGTTACAACCTACAATAAGGTTATGAAAAAAACCTTTAACTATATGCCGGCTGCGCTTTCATGGTTTGCTAGACTTGTTGAGGTAAGTATTCTCCATGCTTTCCTATTCGCTTTTTCACTAATATATCTCAATTTCCTTTGTTTTATGTGGAAGCAGCAATCCTGTCATTTCCGATGTGGGTTTGACATCATAATTCCTGAAAATGAGAGTAGTGGCATTCCAGGATGGTATTTTAATCATCAGTTTCAAGGTGGATCAACTGTAAGGGTAGCGGACTATGCTGATGCAGATGACAACTGGCTTGGATTTTCATTTTGTGTTACATTTGAGCATGTTAAAAATGATTGTGATTCATCTGAGCTGCTGCGTCATTTTTATCTTTCCTTTGAAAGTGAGCACACGGAAGAATATTTTGATATGCCTTCTTCAGTTGAAACTGATCGGGATATTGATGGAACACATGCTTGGATAATCTATATCTCTCGGGTGCATTGCCATTTTGTGAAAACAGGAGCCCGTATAAGATTTAAATCCTGCAAGGGAATGAAGTTGCACAAATGGGGGTTGCGCATGGTGTTCAAACAAGATATAGAGAAACTGAAGAGGAGGTTACAAAGAGTGGATAATAAAAAGCAGAGTCCTATCTCTGATTCTTCCAGACTGGTCGTCACTGAATGTGTTGATGAAGGCGGAAATAGCAGCTCGCAGTCCAAGATTATGCTTCCTTATAATTGGTTAGTTACCGACGAAGAAGAAAATGAGAAGATGGAGGCAAAGGCCAAAGAAGATAATCTCTCAAATTTGGGCTTTATATAG 2013 0.3949 MHDMLQELGKKLVWERYPEEPALWSRLWRCSDFENALMSAETGTNHVKAIVLDQREEMPXCSQLRIRGLSKLRDLKLLILYHKNFLGSLDFLSPNLQYLAWHGYPFPSLPSFQPYSRLVELNLPYSNVKRLWEGNKNIPHLEKVDLSYSVDLIETPNFEWNAKLKQLDFTGCTNLIHIHPSIGLLNQLAYLSLQNCSSLSNLNLGDDCNLSSLRVLCLSGCTNLNKSPDFTGLSNLEYLDLENCTSLSTVHESIGALVMLKFLSLRGCIIISMPKEVNNXISLQTLDLSRCLRLRYPLGQIYSSYLESLISLDLGTCHFIDNIPDSIGVLTCLERLNLEECQCSHLPDTIKKLSRLAYLNLADCSYLERLPELPFDSAPSGGRYFQTVSASRNHRSGLYVTTYNKVMKKTFNYMPAALSWFARLVEVSILHAFLFAFSLIYLNFLCFMWKQQSCHFRCGFDIIIPENESSGIPGWYFNHQFQGGSTVRVADYADADDNWLGFSFCVTFEHVKNDCDSSELLRHFYLSFESEHTEEYFDMPSSVETDRDIDGTHAWIIYISRVHCHFVKTGARIRFKSCKGMKLHKWGLRMVFKQDIEKLKRRLQRVDNKKQSPISDSSRLVVTECVDEGGNSSSQSKIMLPYNWLVTDEEENEKMEAKAKEDNLSNLGFI* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1150 670 Gene3D Ribonuclease Inhibitor 297 398 IPR032675 -
Amo18g1150 670 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 306 613 - -
Amo18g1150 670 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 223 299 - -
Amo18g1150 670 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 225 - -
Amo18g1150 670 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 225 IPR044974 GO:0006952
Amo18g1150 670 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 306 613 IPR044974 GO:0006952
Amo18g1150 670 SUPERFAMILY L domain-like 66 379 - -
Amo18g1150 670 Pfam C-JID domain 469 597 IPR045344 -
Amo18g1150 670 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 223 299 IPR044974 GO:0006952
Amo18g1150 670 Gene3D Ribonuclease Inhibitor 58 204 IPR032675 -
Amo18g1150 670 Gene3D Ribonuclease Inhibitor 205 296 IPR032675 -
Amo18g1150 670 Coils Coil 647 667 - -
Amo18g1150 670 Pfam Leucine Rich Repeat 118 136 IPR011713 -
Amo18g1150 670 Coils Coil 589 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1150 Amo-Chr18 19847487 19850647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1150 209 372 WRKY Transcription Factor Family AT4G12020 37.349 7.73e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1150 - - ahf:112707227 1327.38