Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1149 ATGTTTGACGCACATTGCTTTATCGAGAATGTGAGCAAAAGTTATAGAGAGGGCAGTGCTATTTCCGTTCAAAGACAAATTCTTCGTCGAACTCTAGAGGAACAAGATCTAGATAAATATAGTCCTTCTGAAATAGCTGGGATAATCAGAAATAGGCTATCTTCCAGAAAGCTCCTTATAGTTCTTGATAATGTTGATGAAAGAGAACAATTAGATCAATTGGCTATAAATACTAAATTACTTGGAAGAGGAAGCAGAATAATCATAACGTCCAGGGATAAACATATTCTTGAAAGTTATGGAATAGATGCAATTCACAACGTTTCCTTATTGAATTCTCAAGATGCTTCAGAACTTTTTTTTAGAAAGGCCTTCAAAAGTGATCATCCTAGTAGCAGCACTTGTATGGAGCTAACTCCCATCATACTGGAATATGCTCAAGGTCTTCCATTAGCAATCAAAGTAGTGGGTTCTTTCTTGGACAAACGGAATGCTTCCCAATGGAGGGCTTATTTAGAAAGATTGAAGAAATATCCGGACAAAAAACTTACAGATGTGCTTCAAGTAAGTTTTGAAGACCTGCAAAATGATGATAAAGAAATATTTTTGCACATTGCTTGCTTTTTTAGATGA 633 0.3555 MFDAHCFIENVSKSYREGSAISVQRQILRRTLEEQDLDKYSPSEIAGIIRNRLSSRKLLIVLDNVDEREQLDQLAINTKLLGRGSRIIITSRDKHILESYGIDAIHNVSLLNSQDASELFFRKAFKSDHPSSSTCMELTPIILEYAQGLPLAIKVVGSFLDKRNASQWRAYLERLKKYPDKKLTDVLQVSFEDLQNDDKEIFLHIACFFR* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1149 210 Gene3D - 1 105 IPR027417 -
Amo18g1149 210 PANTHER ARCHAEAL ATPASE 2 209 - -
Amo18g1149 210 PRINTS Disease resistance protein signature 52 66 - -
Amo18g1149 210 PRINTS Disease resistance protein signature 146 160 - -
Amo18g1149 210 Gene3D - 110 195 IPR042197 -
Amo18g1149 210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 205 IPR027417 -
Amo18g1149 210 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 209 IPR044974 GO:0006952
Amo18g1149 210 Pfam NB-ARC domain 2 180 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1149 Amo-Chr18 19846741 19847373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1149 2 210 WRKY Transcription Factor Family AT5G45050 30.374 5.92e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1149 - - ahf:114924356 412.535