Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1141 ATGTACCGTAGAATCAACACCCGACCATTATACGTGGCTGACATAGAGGACCAGGAGAACGAGCCCGAGCCCGCATCAGAAGCCGGGCCTGCTTCTCCTTCCTCAGGTGATGACACAAAATTTGAAGCACCATCACCTAAGAAAAGGAGGGAGATGAAGAAGAGAGTGGTCACAATACCGATCGGTGACGTGGACGGATCTAAGAGCAAAGGAGAATCATATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCACCTTACCCAAGAGGATATTACCGATGCAGCAGCTCAAAAGGGTGCCCGGCGAGGAAGCAAGTTGAACGAAGCCGTGTGTATCCCACAAAGCTCATCGTCACCTACAACTACGAACACAACCACTCTCTTCCGGTAACCAAATCCCACTCCTCCTCCTCTTCCTCCTCTTCYGCCACCRKTAACGCCACCGCTACCGCCGTCACCGAAGTCGYTGTGGCCACCTCTCCCTCCGAGTCCGCCGCTGGCTTCCCGCCGGAGGATCTGACGGTATTCTCGAGCCACGTCGATCTCGACCTCTCCGGCGACTCCGCAGTACTTCTCAGCCACCACAACCACCACGGATTCGGGTGGTTCGACGACGTGGCCTCCGCCGGCGGCGTCCTGGAGAGTCCGATCTGCGGCGGCGTTGATGACATGGCGCTGACGGCGGAGGAAGAGGACGGGGAAGAGTCGCTTTTCGCCGGCCTCGGCGAGCTGCCGGAGTGCTCGGCTGTTTTCCGGAGGAGGAATATTCCAAGCGCCAGCGCGATCCAGTGCGGTGGCATCACAGGATAA 834 0.5791 MYRRINTRPLYVADIEDQENEPEPASEAGPASPSSGDDTKFEAPSPKKRREMKKRVVTIPIGDVDGSKSKGESYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVYPTKLIVTYNYEHNHSLPVTKSHSSSSSSSSATXNATATAVTEVXVATSPSESAAGFPPEDLTVFSSHVDLDLSGDSAVLLSHHNHHGFGWFDDVASAGGVLESPICGGVDDMALTAEEEDGEESLFAGLGELPECSAVFRRRNIPSASAIQCGGITG* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1141 277 PANTHER OS01G0750100 PROTEIN 21 272 - -
Amo18g1141 277 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo18g1141 277 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo18g1141 277 SUPERFAMILY WRKY DNA-binding domain 72 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo18g1141 277 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo18g1141 277 MobiDBLite consensus disorder prediction 1 87 - -
Amo18g1141 277 Gene3D WRKY domain 64 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo18g1141 277 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 272 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1141 Amo-Chr18 19698729 19701941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1141 1 264 WRKY Transcription Factor Family AT3G58710 46.792 3.70e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo18g1141 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1141 - - ahf:112707218 499.975