Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1133 ATGGATGTTGACTCGGAACCACTCAGTTCACAAGACAACGTAGAAGATGGCATGATGATTGGTGTGGAAGAAAATGTTAACTGCACTTGTGATTGCGGTGGCAGTAGTAGTAAGTGTGTGTCTGTGACGGCCGATGATATCATAAACCAGACCTTTGAAACAACGGATGCAGCTTATAACTTGTATGTACGTTATGCAAGGTGTCTCGGGTTTGGAGTTCGCAAGGGTGATACAGCACGTGAAAAAGATGGAACACAGCGCAGAAGGAGTTTGAGTAGGAAGAGGGAGCATAAAGCGCTGACTCGCACTGGTTGTGAAGCCATGTTTGCGGTGTATTTTGACACCAAAACTTCAACTTGGAGGGTTAAAAAATTAGTCGAGAAGCACAACTATGATCTTGTCCCACAATGCTTGGTACACTTAATTCCAAACCACCGAGGGTTGACTGAGGCACAAAAAGCTCAG 465 0.4495 MDVDSEPLSSQDNVEDGMMIGVEENVNCTCDCGGSSSKCVSVTADDIINQTFETTDAAYNLYVRYARCLGFGVRKGDTAREKDGTQRRRSLSRKREHKALTRTGCEAMFAVYFDTKTSTWRVKKLVEKHNYDLVPQCLVHLIPNHRGLTEAQKAQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1133 155 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 149 - -
Amo18g1133 155 Pfam FAR1 DNA-binding domain 61 135 IPR004330 -
Amo18g1133 155 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 8 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1133 Amo-Chr18 19509143 19509656 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g1133 FAR1 2.7e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1133 - - ahf:112717474 290.426