Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1119 ATGGCGGCACCATTTCCTCATCACTTGTTTGTTACACTGTCTATTATTCTTTCTGTTCTTGCTTGTTCTATTGTGAGCAATGCACAACTCTCACCAAATTTCTATGCCAAAACTTGTCCAAATCTTCAGGCCATTGTGCTGAGTGCAATGAAGCAAGCTGTTACCAAGGAACCTCGAATGGGGGCTTCCATACTTCGCTTGTTCTTCCATGATTGCTTCGTTAATGGGTGTGATGGATCAATCTTATTGGATGACACATCCACGTTCACAGGGGAGAAAAGTGCAGGACCAAATCAAAATTCAGCTCGTGGTTTTGAAGTGATAGACTCCATTAAAAGCAATGTTGAAGCTGCTTGCAATGCTACTGTCTCTTGTGCTGACATTCTTGCACTTGCTGCTAGAGATGGAGTAGTTCAGCTAGGAGGACCTTCATGGACAGTTGGGCTAGGAAGAAGGGATGCAAGAACAGCAAGCCAAACTGCAGCCAACAACCAAATCCCTTCACCATTCTCCGACCTTTCCACCCTCACTTCCAGGTTCGCCGCCAAAGGCTTAAATGCTCGCGATCTTACCGCCCTCTCCGGCGCCCACACCATTGGCCAAGCTCAATGCCAGTTCTTCAGAAACCGCGTCTACAACGAAACCAACATCGACGCCAACTTCGCCACATCACGGAAAGCCAACTGCCCTTCCACCGGAGGGAATGCAAACCTCTCCCCTCTCGAAACCCTAACTCCAGCTCGGTTCGACAACAATTACTACAGAGATCTTGTTGCCAAACGCGGCCTTCTTCATTCGGATCAAGTGCTTTTCAATGGTGGGAGTCAAGATGCTTTGGTTCGGTCTTATAGTGCCAATAGTGTTTCTTTTTTCAGTGATTTTGCTGCTGCCATGGTTAAGATGGGAAATATTAGTCCCCTCACTGGGACTAGTGGGGAGATTAGAAAGAATTGTAGGGTGGTGAATTAA 969 0.4696 MAAPFPHHLFVTLSIILSVLACSIVSNAQLSPNFYAKTCPNLQAIVLSAMKQAVTKEPRMGASILRLFFHDCFVNGCDGSILLDDTSTFTGEKSAGPNQNSARGFEVIDSIKSNVEAACNATVSCADILALAARDGVVQLGGPSWTVGLGRRDARTASQTAANNQIPSPFSDLSTLTSRFAAKGLNARDLTALSGAHTIGQAQCQFFRNRVYNETNIDANFATSRKANCPSTGGNANLSPLETLTPARFDNNYYRDLVAKRGLLHSDQVLFNGGSQDALVRSYSANSVSFFSDFAAAMVKMGNISPLTGTSGEIRKNCRVVN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1119 322 CDD secretory_peroxidase 29 321 IPR033905 GO:0004601|GO:0042744
Amo18g1119 322 Pfam Peroxidase 48 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 SUPERFAMILY Heme-dependent peroxidases 29 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Amo18g1119 322 ProSiteProfiles Plant heme peroxidase family profile. 29 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 Gene3D Peroxidase, domain 2 167 301 - -
Amo18g1119 322 PANTHER PEROXIDASE 72-RELATED 22 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PANTHER PEROXIDASE 22 322 - -
Amo18g1119 322 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Amo18g1119 322 Gene3D - 33 319 - -
Amo18g1119 322 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo18g1119 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1119 Amo-Chr18 19418278 19421297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1119 25 322 Peroxidase AT5G05340 67.667 7.56e-148 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1119 K00430 - gmx:100810392 522.316