Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1093 ATGGAGGAGACACGAGAAGATGCAGGCCCGTCAGAGCAAGGTCCATCTAATGTTTCATGGTGGCCGTCTGATTTCGTTGAAAAATTTGGATCTGTTTCATTGGGTTCTCAAGAGGAGGCCTTAAACAATAAAGAATCCCCTAGACATTCTGGTAATGATATTTTGTCACCTAAAAATGCATCTCAAGTTCTCTGGAGCACAGGAATTCTACAAGAGCCAATTCCAAATGGATTTTATTCAATCATTCCGGACACAAGACTCAGAGAACGTTTTGATAGTATTCCTACCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAGGGTTGATATCATTCTTGTGGATTCAGAAAGAGATAAAAAGCTGTCCATGTTAAAGCAACTGATTGTGGCATTAGTTAAAGGATTAAATTCGAATCCAGCTGCAGTTATTAAGAAGATAGCTGGATTAGTTACTGATTTTTATAAGAGACCCAATGTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAACCTGCCACTTGTTTGAAAATCGAGGTGTCCAGATGCTTGGGCAAATTAAACATGGTTCATGCCGTCCTCGAGCTATCTTATTCAAAGCATTAGCTGATACTGTAGGTCTTGAAAGTAGGCTTGTGGTGGGCTTGCCAAATGATGGGACTGTTGAATGCATAGACTCATACAAACACATGTCTGTGATTGTTGAATTGAATTCTGTGGAAATGCTGGTTGATCTTATGCGATTTCCGGGCCAATTGTTACCACGATCAACCAAGGCAGTTATTATGACTCATATTTCTGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCCTTATATGGGGTTTCAGAGAGTGCTGAGAAGGAGGAAAACCTCCAATTTCACAGAAGATTTGAAGCTTCTTCGAATGCATCAGGCCGATCCTTACGTAACATGATGTTACGATCAAACAGTTGTTTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAAGCCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTCGGGCGCGTGCACGGTCCCTGCTAAGTGGTGATAGGACAGCATTTAGAGATTTTGCTGATGATCAGGCTACATCAAGATCCAGCTATAGGTCAGATGGTGCATCCTCATCAGAACCACGTCGGCCACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGTGATGATATTGTTAGGGCTGTGCGGGCAATGAATGAAACCTTGAAGCAAAAACGGGTGGATGATAATTCATTCTCCCATTCTCGAAACAATCAAATTAATGAAGCAAATCTTCAGCAAAATGAGTCAAATTTCCATCTTGATGGTCATGTCCATGTAAATTCACAAAAGGCAATGTCATTACCATCTTCCCCACATGAATATCGAGGTCAGTCTTCTGAGAGAAGTGGGCCATCAAGACGTGACGTGAACCATGAGCTGGAGTCAACTTGGAATAAAGTCCTTGAATCTCCAATGTTCAACAATAAGCCTCTGTTGCCATATGAAGAATGGAATATTAATTTCACAGAATTAACTGTTGGAACTCGTGTAGGGATTGGGTTTTTTGGGGAAGTCTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTGGAGCAAGATTTAACTGCTGAGAACATGGAAGACTTTTGCAATGAGATCTCAATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTCGGTGCTTGCACCAAGCCTCCTCATCTGTCAATGGTTACGGAATACATGGAGATGGGATCATTGTATTACTTGATACATTTGAGTGGTCAAAACAAAAAGCTTAGCTGGCGGCGAAGATTAAAGATGTTGCGTGACATATGTAGAGGGTTGATGTGCATTCACCGTATGAAGATTGTTCACCGTGATCTGAAAAGTGCAAACTGTCTAGTGAACAAGCATTGGACCGTCAAGATATGTGATTTTGGGCTTTCAAGAATAATGACAGAATCTCCCATGCAAGATCCCTCATCCGCTGGAACTCCGGAATGGATGGCCCCTGAACTCATCCGAAATGAACCGTTCACCGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATTTGGGAGCTCTGTACCTTGAGCAGACCATGGGAAGGTGTACCACCTGAGAGGGTGGTTTATTCGGTTGCTAACGAGGGTTCTAGATTGGAGATTCCTGAAGGCCCCCTAGGCAGGCTGATTTCAGACTGTTGGGCAGAGTCACATGAACGGCCAAGTTGTGAGGAGATTCTTTCACGCTTGTTGGACATCGAGTACTCAATGTGCTGA 2388 0.4301 MEETREDAGPSEQGPSNVSWWPSDFVEKFGSVSLGSQEEALNNKESPRHSGNDILSPKNASQVLWSTGILQEPIPNGFYSIIPDTRLRERFDSIPTLDELHALSGEGFRVDIILVDSERDKKLSMLKQLIVALVKGLNSNPAAVIKKIAGLVTDFYKRPNVESPAKAALDETCHLFENRGVQMLGQIKHGSCRPRAILFKALADTVGLESRLVVGLPNDGTVECIDSYKHMSVIVELNSVEMLVDLMRFPGQLLPRSTKAVIMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESAEKEENLQFHRRFEASSNASGRSLRNMMLRSNSCLSLSHSEPNIATAFGRRSRRKAIAEQRTASSSPEHPSFRARARSLLSGDRTAFRDFADDQATSRSSYRSDGASSSEPRRPRRRSISITPEIGDDIVRAVRAMNETLKQKRVDDNSFSHSRNNQINEANLQQNESNFHLDGHVHVNSQKAMSLPSSPHEYRGQSSERSGPSRRDVNHELESTWNKVLESPMFNNKPLLPYEEWNINFTELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPHLSMVTEYMEMGSLYYLIHLSGQNKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMQDPSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIIWELCTLSRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISDCWAESHERPSCEEILSRLLDIEYSMC* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1093 795 MobiDBLite consensus disorder prediction 478 504 - -
Amo18g1093 795 SUPERFAMILY Protein kinase-like (PK-like) 511 787 IPR011009 -
Amo18g1093 795 MobiDBLite consensus disorder prediction 342 369 - -
Amo18g1093 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Amo18g1093 795 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Amo18g1093 795 MobiDBLite consensus disorder prediction 36 55 - -
Amo18g1093 795 ProSiteProfiles Protein kinase domain profile. 539 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1093 795 Gene3D Transferase(Phosphotransferase) domain 1 618 794 - -
Amo18g1093 795 SMART serkin_6 539 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1093 795 MobiDBLite consensus disorder prediction 404 418 - -
Amo18g1093 795 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 793 - -
Amo18g1093 795 MobiDBLite consensus disorder prediction 388 403 - -
Amo18g1093 795 MobiDBLite consensus disorder prediction 381 419 - -
Amo18g1093 795 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 793 - -
Amo18g1093 795 MobiDBLite consensus disorder prediction 1 21 - -
Amo18g1093 795 Pfam Protein tyrosine and serine/threonine kinase 540 787 IPR001245 GO:0004672|GO:0006468
Amo18g1093 795 Gene3D Phosphorylase Kinase; domain 1 532 617 - -
Amo18g1093 795 CDD STKc_MAP3K-like 545 787 - -
Amo18g1093 795 MobiDBLite consensus disorder prediction 478 493 - -
Amo18g1093 795 ProSitePatterns Protein kinases ATP-binding region signature. 545 566 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1093 Amo-Chr18 18740759 18749866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1093 1 795 MAP Kinase Kinase Kinase AT3G58640 70.158 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Amo18g1093 PK_Tyr_Ser-Thr 2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1093 - - aprc:113853840 1394.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1093 18 18740759 18749866 Amo18g1093 18 18740759 18749866 ECH
Amo18g1093 18 18740759 18749866 Amo08g1358 08 22136200 22151578 hybridization