Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1088 ATGATGCCCAATTTTCTTATTTCAAGGTTAGCTTCTTCCTTTAAAACCCTAAACCTCAACAACCCCAACTCCCAATTGAATCTTCTTCAACAGCATAAATCGCATCTCCTTTTCTTCAATTCACTCGCAACCAAAGATACCAAACGCCCAAAAGATCGCAACTTTACAATCTCCTACCTAATCGCCACATGCGGATTCTCTCCCAAAACCGCCGCGCTTTTGTCACAAAAGGTTCACTTCAAAACCCCTGAAAAGCCAAACGCGGTCTTAGCCCTCCTCAGAAAATATGGATTCTCCGAAACGCAGGCTAAGTACATTCAGAAGCGACCCATGTTGCTCCTCACTGATGCAGAAAAGATCATTAAGCCCAAGCTCAAGTTTTTCTCCTCCATTGGGATTTCACGCGTTGACCTTCCAAAACTCGAGCCTTGGAGCTTGGAGAAGTGCCTCATTCCGCGCTATGAGGTCCTGAAGAGTGTTGTTCGAAGTGAGCAAGAAGTTATTAGTTCATTGAAGCGTGGTGCAATGGCTTTTGTGTTGTGTGATGTGATAAAGAATTTGATTCCCAACACAAAGATTTTGAGAGATTTGGGTGTGCCTCAGAGTTCTATCTCAATGTTGTTGGCAAAGGAAATGGGGTTTGATCCTAACAAGTGCAGTTTCATCAGTGCCATACATGTGCTCTTGCATATGGATCGGAAAACGAAGTCTTTGGAGAAATGGGGTTGGTCAAAAGAGGCGTCCCTTTTGTCGTTTAGAAAGTTCCCTGCTTTTATGTCATATTCGCCGGAGAGGATCGGGCCAGCAATGAGATTCTTGGTGGAGGATATGGGTTGGTCTTCCGAGGAGATTGCCAGGTTCCCCACAACTCTAGGATACAGCTTTGGAGAAGAGGGTTATCCCTAG 906 0.4492 MMPNFLISRLASSFKTLNLNNPNSQLNLLQQHKSHLLFFNSLATKDTKRPKDRNFTISYLIATCGFSPKTAALLSQKVHFKTPEKPNAVLALLRKYGFSETQAKYIQKRPMLLLTDAEKIIKPKLKFFSSIGISRVDLPKLEPWSLEKCLIPRYEVLKSVVRSEQEVISSLKRGAMAFVLCDVIKNLIPNTKILRDLGVPQSSISMLLAKEMGFDPNKCSFISAIHVLLHMDRKTKSLEKWGWSKEASLLSFRKFPAFMSYSPERIGPAMRFLVEDMGWSSEEIARFPTTLGYSFGEEGYP* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1088 301 PANTHER CGI-12 PROTEIN-RELATED 22 295 IPR003690 GO:0003690|GO:0006355
Amo18g1088 301 Gene3D Transcription termination factor 3, mitochondrial 67 140 IPR038538 -
Amo18g1088 301 Gene3D Transcription termination factor 3, mitochondrial 141 298 IPR038538 -
Amo18g1088 301 SMART mt_12 175 200 IPR003690 GO:0003690|GO:0006355
Amo18g1088 301 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Amo18g1088 301 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Amo18g1088 301 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 295 - -
Amo18g1088 301 Pfam mTERF 232 295 IPR003690 GO:0003690|GO:0006355
Amo18g1088 301 Pfam mTERF 90 213 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1088 Amo-Chr18 18686030 18687004 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo18g1088 mTERF 1.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1088 K15032 - gmx:100777030 245.743