Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1049 ATGGCTCCTCCGTGGGTCCAAGAGCTCCATCTGCCTCATCTCACCGTTCCAGTTACCATTGACGCCATGTACCCTGTCATGCCATCGCACCCTATACCCGTCCAATATGGAGACACCCTCTACCTCTCCAACCTCGACGACATGATCGGAGCTCGTGTCTTCACACCCACCGTGTACTTTTACCAACAAACCACCGCCAACAGTTGTGCCAATTCACAAAAACCCATAGTCAAAACACTTCAAGATGCCCTTGCTGATGTCTTGGTCCCTTACTACCCTCTCTCAGGGAGGCTAAGGGAGACCAGCAACGGGAAATTAGAAGTGTTCTTTGGTCCAAGCCAAGGTGCACTCATGGTTCAGGCACATTCCGATGTGGCTTTATCCGAATTAGGAGACCTCACTGCACCAAACCCAACTTGGGAGCCATTAATCTTCAAGTTCCCTAATGAAGAGCCATACAAAGTCCTTGACATGCCGCTTGTAATAGCACAAATCACAATCTTCCGCTGCGGCGGATTCAGCCTTGGGTTGCGACTCTGTCATTGCATCTGCGACGGCCTAGGAGCCATGCAGTTTCTAGGCGCATGGGCTGCAACTGCAAAGGCTAGGACTTTGGTAACAAATCCAAGGCCAATTTGGGATAGAGAGGTTTTCAAACCCCGTGACCCGCCTCATATACAATTCCCCCACATGGAGTTTAGGAAAATTCAAGAAGGCTCAAATCTCACAATGTCGTTATGGGAAACTAAACCGTTACAGAAGTGCTATCGCATCACGCGGGAGTTCCAAAACCTTATAAAATCCCTTGCCATGCCACGTGACGGTTATGGCTGCACAACATTCGACGCAATGGCTGCACACGTGTGGAGGTCGTGGGTCAATGCCCTCGATGTGAGACCATTGACCTACGACTTAAGGTTGACATTTTCAGTCAATGCAAGACAAAAGCTCCGGAATCCACCCTTGAAGGAAGGGTTCTACGGCAATGTAGTGTGTGTACCTTGCACAACAAGCAAAGTTTCAGAGCTTGTGAACCCTGAACGGCTTTCGGAGACAACGAGGTTGGTTCGAGAAGCAAGGCTAAGTGTGTCGGAGGAATATTTGAGGTCAACGGTGGATTTCGTTGACTTGGAGAGGCCAAAGCAACTAGAGTTTGGAGGGAAGCTAACAATAACTCAGTGGACAAGGTTTTCAATATACAAGTGTGCAGATTTTGGGTGGGGAAGGCCACTATATGCTGGTCCTATAGACTTGACTCCTACGCCTCAAGTTTGTGTTTTTTTACCCGAAGGACAAGATGGTAGTGGTGGTGATTCTTGTTCCGGTGGTGGTTCTATGATTGTGTGTATATGTTTGCCAGAATCTGCTGCTCATAAGTTTACTCAAGCATTCATGTTGTTGGATAACTCAAAATTCACACATTAG 1425 0.48 MAPPWVQELHLPHLTVPVTIDAMYPVMPSHPIPVQYGDTLYLSNLDDMIGARVFTPTVYFYQQTTANSCANSQKPIVKTLQDALADVLVPYYPLSGRLRETSNGKLEVFFGPSQGALMVQAHSDVALSELGDLTAPNPTWEPLIFKFPNEEPYKVLDMPLVIAQITIFRCGGFSLGLRLCHCICDGLGAMQFLGAWAATAKARTLVTNPRPIWDREVFKPRDPPHIQFPHMEFRKIQEGSNLTMSLWETKPLQKCYRITREFQNLIKSLAMPRDGYGCTTFDAMAAHVWRSWVNALDVRPLTYDLRLTFSVNARQKLRNPPLKEGFYGNVVCVPCTTSKVSELVNPERLSETTRLVREARLSVSEEYLRSTVDFVDLERPKQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGQDGSGGDSCSGGGSMIVCICLPESAAHKFTQAFMLLDNSKFTH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1049 474 Pfam Transferase family 17 464 - -
Amo18g1049 474 PANTHER F21B7.2 12 468 - -
Amo18g1049 474 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 468 - -
Amo18g1049 474 Gene3D - 243 466 IPR023213 -
Amo18g1049 474 Gene3D - 16 235 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1049 Amo-Chr18 17401422 17402936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1049 26 466 Monolignol Biosynthesis Gene Families AT5G48930 28.571 1.80e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1049 K15400 - gmx:100802814 767.303