Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1040 ATGTTGACTCCAAAGGTTTTCATTGGTTTGCTTGTTGGTGCAATGCTTCCATATTGGTTTTCTTCCATGACCATGAAGAGTGTGGGAAGTGATGCACTAAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATTCCTGGCCTGATGGAGGGAACTGCCAAGCCTGACTACGCCACATGCGTTAAGATCTCCACCGATGCTTCCATTAAAGAAATGATCCCGCCTGGCGCCCTTGTCATGCTTACACCCCTCATTGCTGGTGCATCTGAGCATGCGAGAAGCCTTGGGCCAAAGGGGTCAGATTGTCACAAGGCAGCTGTGATTGGAGACTCTATTGGGGACTCACTGAAGCACATATCTGGACCCTCACTCAACATTCTCATCAAACTTATGGCCGTTGAGTCCCTTGTCTTTGCTCCCTTCTTTGCCACCCATGGTGGCCTCCTTTTCAAGATCTAA 462 0.4892 MLTPKVFIGLLVGAMLPYWFSSMTMKSVGSDALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIAGASEHARSLGPKGSDCHKAAVIGDSIGDSLKHISGPSLNILIKLMAVESLVFAPFFATHGGLLFKI* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1040 153 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 87 153 - -
Amo18g1040 153 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 2 88 - -
Amo18g1040 153 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 87 153 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Amo18g1040 153 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 2 88 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Amo18g1040 153 Pfam Inorganic H+ pyrophosphatase 95 139 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Amo18g1040 153 Pfam Inorganic H+ pyrophosphatase 2 90 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1040 Amo-Chr18 17121515 17122283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1040 4 143 Primary Pumps ATPases AT1G78920 37.566 3.26e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1040 K23025 - gmx:100775864 267.7