Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1035 ATGGGAATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGTGGTCACATTGTTCGATCCACCGGCCGGAAAGATCGACACAGCAAGGTTTACACGGCGAAAGGGCCGCGTGACCGTCGAGTTAGGCTCTCGGCACACACTGCAATCCAATTCTATGATGTCCAAGACAGGCTTGGTTATGACAGGCCAAGCAAGGCAGTGGACTGGCTTATCAAGAAGGCCAAAGCAGCCATCGACAAACTCGCCGAGCTCCCTCCTTGGGAGCCTACACCTCCTCCTCCCACTACCAATGAGGTGGAGGAGGATCAGAATGGAGGATCAACTGACATGGCAATTGCAGAACAGTCAGAGTCTTCTGGTTACAATTTTCAGCTTCAAAGGCAACTTGGTGAAGACCCTGAAAACCAACACCACCACTCAGCATTCATTCCTTCACCTATTGACACTGATGGTGGCATAGCATTTTTCCCAACAACGTCTGCTGCTTCCTCCATCAATTTCCAGAGCTACCCTCCTGAGATAATCTCAAGGACCAACAACTCCTCAGAGGATCTTGGACTTTCCCTTCATTCTTTCCAAGATTCTGGCCTAATTCATCATCATGGACAGTCACAACAAGGAGGTGGTGCAGATCATCAAAACCCTTCTTCAAATGACCAAACTCTCTTTGCTAACTACCAGAGAATGGTGGCCTGGAACAGTGATGCCGGAGGCACGCAAGCCGACATGAACCGTTCCGGTTTCATGGTGAATTCACCTGGTTTTTCTTCTGCTTTTTCTCATCATCAACAAAGGGGTACCCTTCAGTCCAGTTTCTCACCATCACTTCGCCCTTGGAGTGAGATTCCTCAAATGGCTTCTTCTAACGAGCATCACCACAACCACAAGTCTCAGCCAATCCAGCAGCAACACCAAGCTTCAATCTTTGGAAGCAGGTTCCTCTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGGATTCAAGGTGAAGATGAGAGCCATGGTGTTGGTTCTGACAGGCCTTCATCTTCTGCTTCTCCTAATTCACATCACTGA 1059 0.4901 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDKLAELPPWEPTPPPPTTNEVEEDQNGGSTDMAIAEQSESSGYNFQLQRQLGEDPENQHHHSAFIPSPIDTDGGIAFFPTTSAASSINFQSYPPEIISRTNNSSEDLGLSLHSFQDSGLIHHHGQSQQGGGADHQNPSSNDQTLFANYQRMVAWNSDAGGTQADMNRSGFMVNSPGFSSAFSHHQQRGTLQSSFSPSLRPWSEIPQMASSNEHHHNHKSQPIQQQHQASIFGSRFLSDALPGFCIPARIQGEDESHGVGSDRPSSSASPNSHH* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1035 352 MobiDBLite consensus disorder prediction 199 220 - -
Amo18g1035 352 MobiDBLite consensus disorder prediction 1 30 - -
Amo18g1035 352 Pfam TCP family transcription factor 23 124 IPR017887 -
Amo18g1035 352 MobiDBLite consensus disorder prediction 327 352 - -
Amo18g1035 352 MobiDBLite consensus disorder prediction 260 281 - -
Amo18g1035 352 MobiDBLite consensus disorder prediction 85 106 - -
Amo18g1035 352 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Amo18g1035 352 PANTHER TRANSCRIPTION FACTOR TCP4 2 352 - -
Amo18g1035 352 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 352 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1035 Amo-Chr18 16936959 16939252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1035 8 351 TCP Transcription Factor Family AT3G15030 42.432 3.97e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Amo18g1035 TCP 3.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1035 - - gmx:100814907 464.922