Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0998 ATGATGAAAGACAACTTGAAGAACAAATGTGGATCTTCTTCTCATCAATCCATGAAGGAGAAGGAAAAACACCATCTTGATAAAATTCAGGGAATTTTCATCAATCTTCAGTCTTCAAGGAAGGAGAATAGGTATAAAGACATTGTTATGTTTGAGGAGCAGATGCATCAACTGCTTAGAGAGTGGAAAGCAGAACTAGAGTCTCCAGCAACCTCCTTAGCTGAAGGAAGCCTTGGTTCATTTCCAGGGGAGCTGGCTCAACTTTTGCAAGAACTTGAGGAGAACGATGATGCAATCAGTCCATTAGAAAAGCCTGAAACATTGAAGACTCAACTGCATCCTCACACTGTTCATGATGTGAACTATCCATCTTTTCATGAAAAGTCTTTTGATGATAGCCACATGTTACATGATACTTTTGAAGGATTTGGTCAGTTTGATGGCCCTGCTTCAACTCTACAAAGTGATACCTCAGATATGATTACTCAGTTGGATTCCCATACACTAGTTATCGAAGAAGGCTTTGATTATGGCCAATTTTTTGAAAATGAGGCCAAACAGTGTGAAGAGGATACTATGCCCAACGTTCTTCCAAATATCTGCCCTCCTCCTTCTGCTTTTTTAGGCCCTAAATGTTCTCTATGGGATTGTTTCAGACCTGCTCAAGGGTTGCAAATTTGCCAGGACTACTGCAGCAGCGGTCATGAGCTTTTGGCAAATAACGAGGGTCTTCCTGGAATGACCCCAATTTTGCGCCCTGGAGGCATTGGAGTAAAAGATGGCCCTTTATTTGCTGCACTTCTTGCAAAGACACAGGGAAAGGAAGTTGGCATCCCTAAATGTGAGGGCGCTGCTTCAACTAAATCCCCGTGGAAAGCTCCTGAGTTATTTGATCTCTCTTTTCTTGAGGGTGAAACTTTGAGGGAGTGGCTCTTCTTCGACCAGCCTAGAAGGGCATTTGTGAGCGGAAATAGAAAGCAAAGATCACTTCCAGATTACAATGGGCGTGGCTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACATGGGGGACATAAGAGGTCCTATTATATGGATCCCCAGCCCCTAAGCTATCTCGAGTGGCATTTGTATGAGTATGAGATCAACAACCAAGATAGCTTAGCATTGTATCGACTGGAACTAAAGTTTGTCGATAATAAAAAGAAAAGTCCTAAAGCAAAATTGACAAAGGAATCTCTTGCTGATTTACAAAATAAGATGGGAAAGCTAAGTGCTGATGTTTTGGGAGATGATGGAGGCACCGCTGACGGAAAAATAAAGGCCAAGTCTGAGAATGGTGGATCTCCTGAGCATGAAACAAAAAATCCAGAGTGA 1356 0.4248 MMKDNLKNKCGSSSHQSMKEKEKHHLDKIQGIFINLQSSRKENRYKDIVMFEEQMHQLLREWKAELESPATSLAEGSLGSFPGELAQLLQELEENDDAISPLEKPETLKTQLHPHTVHDVNYPSFHEKSFDDSHMLHDTFEGFGQFDGPASTLQSDTSDMITQLDSHTLVIEEGFDYGQFFENEAKQCEEDTMPNVLPNICPPPSAFLGPKCSLWDCFRPAQGLQICQDYCSSGHELLANNEGLPGMTPILRPGGIGVKDGPLFAALLAKTQGKEVGIPKCEGAASTKSPWKAPELFDLSFLEGETLREWLFFDQPRRAFVSGNRKQRSLPDYNGRGWHESRKQVMKEHGGHKRSYYMDPQPLSYLEWHLYEYEINNQDSLALYRLELKFVDNKKKSPKAKLTKESLADLQNKMGKLSADVLGDDGGTADGKIKAKSENGGSPEHETKNPE* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0998 451 MobiDBLite consensus disorder prediction 1 24 - -
Amo18g0998 451 MobiDBLite consensus disorder prediction 427 451 - -
Amo18g0998 451 Coils Coil 400 420 - -
Amo18g0998 451 MobiDBLite consensus disorder prediction 418 451 - -
Amo18g0998 451 PANTHER TRANSCRIPTION FACTOR VOZ1 2 439 IPR039277 GO:0006355|GO:0048578
Amo18g0998 451 PANTHER TRANSCRIPTION FACTOR VOZ2 2 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0998 Amo-Chr18 16264814 16268296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0998 1 420 VOZ-9 Transcription Factor Family AT1G28520 54.273 6.89e-150 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Amo18g0998 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0998 - - gmx:100792210 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0998 18 16264814 16268296 Amo18g0998 18 16264814 16268296 ECH