Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0985 ATGGCAAAAAAACACGCCATAGGAATCGATCTTGGCACCACGTATTCATGTGTTGCTATCTGGGAGGAGCGAAATTCTCGCGCCGAGATCATTCACAACGATCAAGGAAACAGAACAACCCCTTCTTTTGTTGCTTTCACTAATTCACAGAGATTGGTCGGTGATGCTGCCAAAAATCAGGCTTCAACCAACCCAACTAACACTGTCTTTGATGCTAAGAGGTTGATTGGTAGGAAATATAGCGATCCTGTTATTGAGAATGATTTGAAGCTTTGGCCGTTTAAGGTTGTAGCCGATGCTGAAGACAAGCCAAAGATTGTTGTTAACTATAAAGGCCAAGAAAACGAACTTACTCCTGAAGAGATTTCATCTATGATCCTCACAAAAATGAAGGACATTGCAGGGGCATTTTTGGAATCTCCTGTGACTGATGCTGTTGTTACTGTCCCTGCTTATTTCAGCCACTCTCAGCGGAAAGCCACAAAAGATGCCGGAACCATTGCCGGCCTAAATGTTATGAGGATCATCAATGAACCTACAGCTGCGGCTCTTGCTTATGGCCTTCAGAAGAGGCCTAATTGCGTCGGAAAGCGCAATGTATTTGTTTTTGATCTCGGTGGTGGCACCCTTGACGTTAAGGCCACCGCCGGAGACACTCATTTAGGAGGAGAAGATTTTGACAATAGAATGGTGCGTTATCTTGCTAAAGAGTTCAAAAGGAAGTACAAAGAAGACATGAATGGGAACTCAAAAGCTTTAAGGAGGTTGAGAAATGAGTGTGAGAAAGCCAAGAGAATACTCTCATATAACAATGAAGCCACCATTGACATAGATGCTTTGTTTCAAGGCATTGACTTCCATTCAACCATGACTCGTGCCAGGTTTGAGAAACTCAACGATGATCTATTTGAAAAGTGTATGGACACAGTTAAGAGGTGTCTTGATGATGCCAGAGTCGACAAGAATCATGTACATGACTTAGTTCTTGTCGGCGGCTCATCAAGAATCCCCAAAGTTCAGAAGCTTCTGCAGAGTTTCTTTCCTGGAAAGGAACTCTGCAAGAGTATCAACCCCGACGAAGCCGTCGCTTATGGCGCCGCCGTTCAGGCTTATATGATAAATAACGGTCAGGGAGGCAATGATAGTAAGACTTTGAAGAACTTGGTCTTAATGGACGTTACTCCGCTTTCGCTGGGAACATCGATAAAAGGGGATCTCATGAGTGTTTTGATTCCAAGAAATACTCCAATTCCTGCAAAGAAAAAAGGAACATACTTCACAGATTCTGATGACCAACCTACAGTTTGCGTTGATGTGTATGAAGGAGAGAGGTTAAGAGCAAGTGAGAACAACATGCTTGGATTGTTCTCTTTCGATGTTCCTCCGGCCCCACGTGGCTTTCCAATCTATATATGTTTCGATGTAAATGAAGATGGGATCCTGAGTGTGTCTGCGAAGGAAAAACTCACCGGAAAGAAACAAGAGATTACAATAAATAATGGCACGGGAAGGTTTTCGGCCAAGGAAGTTGCGAAAATGATTGAAGAAGCTGAAATGTTGAAGGATGAAGATGAGAAGTACAAAGAGAGAGTTAAAGCAAAGAATGCTTTGGATGAATGTGTGTATAAAGTGAAGAAAGCTATCAAGGATGGGAACTTCTTCTCTAAGGTTTCTGCAATGGATAAACAGAGGATTATGGCTGCTATTAGAGAGACCAGAGATATGGTTAATAATGATGGGGTGGAGCAAGGGGAAACGTATCAGTATAAGAAGTGTTTGATGGAGTTGCAGAGTGTTACTAATGAAATAATGGACAAAATTAACAGTGATTATGAAGAAAGTGATAATGAGGATTAA 1857 0.4211 MAKKHAIGIDLGTTYSCVAIWEERNSRAEIIHNDQGNRTTPSFVAFTNSQRLVGDAAKNQASTNPTNTVFDAKRLIGRKYSDPVIENDLKLWPFKVVADAEDKPKIVVNYKGQENELTPEEISSMILTKMKDIAGAFLESPVTDAVVTVPAYFSHSQRKATKDAGTIAGLNVMRIINEPTAAALAYGLQKRPNCVGKRNVFVFDLGGGTLDVKATAGDTHLGGEDFDNRMVRYLAKEFKRKYKEDMNGNSKALRRLRNECEKAKRILSYNNEATIDIDALFQGIDFHSTMTRARFEKLNDDLFEKCMDTVKRCLDDARVDKNHVHDLVLVGGSSRIPKVQKLLQSFFPGKELCKSINPDEAVAYGAAVQAYMINNGQGGNDSKTLKNLVLMDVTPLSLGTSIKGDLMSVLIPRNTPIPAKKKGTYFTDSDDQPTVCVDVYEGERLRASENNMLGLFSFDVPPAPRGFPIYICFDVNEDGILSVSAKEKLTGKKQEITINNGTGRFSAKEVAKMIEEAEMLKDEDEKYKERVKAKNALDECVYKVKKAIKDGNFFSKVSAMDKQRIMAAIRETRDMVNNDGVEQGETYQYKKCLMELQSVTNEIMDKINSDYEESDNED* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0985 618 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 608 - -
Amo18g0985 618 PANTHER HEAT SHOCK PROTEIN 70KDA 4 608 IPR013126 GO:0005524|GO:0140662
Amo18g0985 618 Coils Coil 239 259 - -
Amo18g0985 618 Pfam Hsp70 protein 6 607 IPR013126 GO:0005524|GO:0140662
Amo18g0985 618 Gene3D - 535 609 IPR029048 -
Amo18g0985 618 SUPERFAMILY Actin-like ATPase domain 5 190 IPR043129 -
Amo18g0985 618 SUPERFAMILY Actin-like ATPase domain 197 372 IPR043129 -
Amo18g0985 618 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 538 IPR029047 -
Amo18g0985 618 ProSitePatterns Heat shock hsp70 proteins family signature 3. 327 341 IPR018181 -
Amo18g0985 618 Gene3D - 191 353 - -
Amo18g0985 618 Gene3D Actin; Chain A, domain 4 223 305 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 387 406 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 466 482 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 57 65 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 324 340 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 35 47 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 208 218 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 145 165 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 356 376 - -
Amo18g0985 618 PRINTS 70kDa heat shock protein signature 5 18 - -
Amo18g0985 618 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 382 534 IPR029047 -
Amo18g0985 618 Coils Coil 510 530 - -
Amo18g0985 618 Gene3D - 7 370 - -
Amo18g0985 618 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Amo18g0985 618 Gene3D - 70 125 - -
Amo18g0985 618 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 533 610 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0985 Amo-Chr18 15913269 15915237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0985 6 607 Calmodulin-binding Proteins AT3G12580 59.740 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0985 K03283 - gmx:102667578 751.895