Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0980 ATGGAGGGTGGACCTTATATGATGCAGCATCCATCAATATCACAGAAGCTAGGTGGAGGATCTTTTCTTGTGTCCAAGCTTGCCACTGGATTTCACTCAAGAAACTCTTCCAGCAGTGGCATTTACCTCAATGGCTTTGTGGCCGTGACCCCGATGGTATCGCCGGTCACAGCTTACTCTCCGGCGGAGAAAGGAGGAGCTACTACTTCTTTCATAGTGGATTTTCTGATGGGAGGAGTGTCTGCTGCTGTGTCTAAGACTGCGGCCGCGCCGATCGAGAGAGTTAAGCTGCTAATTCAGAACCAGGATGAGATGCTCAAGACTGGTCGGTTGTCTCATCCGTACAAGGGAATTGGTGATTGTTTTGCTAGAACTATTAAGGATGAAGGGATGCTTTCACTTTGGAGAGGAAACACTGCTAATGTTATCAGATACTTCCCTACTCAGGCGCTGAACTTTGCTTTCAAGGATTATTTTAAGAAGCTCTTCAACTTCAAGAAAGACAGAGATGGCTATTGGAAATGGTTTGCTGGGAACTTGGCATCTGGTGGGGCTGCCGGAGCTTCTTCCCTCTTGTTTGTTTATTCTTTGGACTTTGCCAGAACTCGTTTGGCCAATGATGCCAAGGTTGCTGCTAAGCAGGGTGGTCAAAGGCAGTTCAATGGCTTGATTGATGTTTACACCAAAACCATTAAATCCGATGGTATCACTGGCCTTTATCGCGGATTCACCATCTCTTGTGTTGGGATTGTTGTGTATCGTGGTCTCTATTTCGGAATGTATGATTCTTTGAAACCAGTGGTTCTGGTCGATGGCTTGCAGGATAGTTTCTTTGCAAGTTTCTTTTTGGGTTGGGGGATCACAATAGGTGCTGGCTTGGCCTCTTACCCAATTGATACTGTTCGTAGAAGAATGATGATGACATCCGGAGAAGCCGTGAAATACAGCGGCTCTGTGGATGCATTCAAGCAGATCATCGCCAAAGAGGGTGCTAAGTCACTCTTCAAAGGTGCCGGTGCAAACATATTGCGTGCTGTTGCAGGTGCCGGTGTGCTTGCCGGCTATGACAAGCTACAGCTCCTCTTGTTTGGAAAGAAATATGGTTCTGGTGGTGGAGGCTAA 1122 0.4697 MEGGPYMMQHPSISQKLGGGSFLVSKLATGFHSRNSSSSGIYLNGFVAVTPMVSPVTAYSPAEKGGATTSFIVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSHPYKGIGDCFARTIKDEGMLSLWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDFARTRLANDAKVAAKQGGQRQFNGLIDVYTKTIKSDGITGLYRGFTISCVGIVVYRGLYFGMYDSLKPVVLVDGLQDSFFASFFLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYSGSVDAFKQIIAKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLLLFGKKYGSGGGG* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0980 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 275 361 IPR018108 -
Amo18g0980 373 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Amo18g0980 373 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Amo18g0980 373 PRINTS Mitochondrial carrier protein signature 137 157 IPR002067 GO:0055085
Amo18g0980 373 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Amo18g0980 373 PRINTS Mitochondrial carrier protein signature 240 258 IPR002067 GO:0055085
Amo18g0980 373 PRINTS Mitochondrial carrier protein signature 284 306 IPR002067 GO:0055085
Amo18g0980 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 267 IPR018108 -
Amo18g0980 373 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 47 372 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0980 373 SUPERFAMILY Mitochondrial carrier 69 357 IPR023395 -
Amo18g0980 373 Gene3D Mitochondrial carrier domain 72 368 IPR023395 -
Amo18g0980 373 PRINTS Adenine nucleotide translocator signature 71 83 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0980 373 PRINTS Adenine nucleotide translocator signature 115 136 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0980 373 PRINTS Adenine nucleotide translocator signature 148 160 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0980 373 PRINTS Adenine nucleotide translocator signature 174 187 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0980 373 PRINTS Adenine nucleotide translocator signature 280 296 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0980 373 Pfam Mitochondrial carrier protein 276 364 IPR018108 -
Amo18g0980 373 Pfam Mitochondrial carrier protein 173 268 IPR018108 -
Amo18g0980 373 Pfam Mitochondrial carrier protein 69 166 IPR018108 -
Amo18g0980 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 162 IPR018108 -
Amo18g0980 373 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 47 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0980 Amo-Chr18 15881672 15883862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0980 9 363 Antiporters AT4G28390 77.236 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0980 K05863 - gmx:100818408 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0980 18 15881672 15883862 Amo18g0980 18 15881672 15883862 ECH