Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0965 ATGGATCATTCAACCTCAGATTGTCAGCTGAATCCAGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGGTGTATTATATCAGACATGATTGGGTGTTTCTGACACGGTGTATTGTGCAGCCTCTCTCGGTTGTTGATGACGAGCTTGTTCCGAAGGTCGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGAAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACAAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGCAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACGATAGAGAATAACGAGGAGGCCGACCGTCACATATGGGTTCCTATCTATCTGGATCACCACTTCTGGGCAGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTTTTTTTTAACAAGTTATCACCCGGAACAGCTCGCTTATTCAGTTTGTCAAACAATACGATAA 687 0.4396 MDHSTSDCQLNPGEVDYEFESNEVPEVYYIRHDWVFLTRCIVQPLSVVDDELVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREEKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEADRHIWVPIYLDHHFWAGMRSTQRSESMHFFLTSYHPEQLAYSVCQTIR* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0965 228 PANTHER OS06G0517100 PROTEIN 181 214 - -
Amo18g0965 228 PANTHER OS06G0517100 PROTEIN 56 175 - -
Amo18g0965 228 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 181 214 IPR031052 GO:0006355
Amo18g0965 228 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 175 IPR031052 GO:0006355
Amo18g0965 228 Pfam FAR1 DNA-binding domain 68 153 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0965 Amo-Chr18 15643970 15646034 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g0965 FAR1 1.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0965 - - adu:110278638 310.071