Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0943 ATGGCTCCTGAGAACGACAACTATGATGAGGTGAAGATCATAGAAAATTGTCAAGTTGCTCCACCACAAGGCTCTCTTCCCTCAACCACACTTCCCTTCACTTTCTTCGATATTCAATGGTTCCTTTGCCACCCCGTCAAGCGCATCTTCTTCTATGACTTCCCTTACCCTACCAACCACTTCCTTCAAGCATCACTCCCTCCTCTCAAACACTCTCTTTCCCTCACTCTTCAACACTTCTTCCCTTTCGCCTCCAAACTCATCTGGCCTCCACCACCCCACGAACCTTTCATGCGCTATCACCAAGGTAGCGACTCAGTTACTTTCACGGTTGCGGAGTCCAAAGCTGATTTCAATCTTCTTGTATCTGATTCACCACAAAATGCAAGAGATTGGCACCCTTTTGTTCCTTCTTTGCCTCCACAAGATACCTTAGAGAATGGCACTCGTGTGATCCCTRTAATGGCGATTCAAGTAACCATGATACCGAATTCTGGATTCGCTATTTGTCTCACTTTCAACCACCTTGTTGCGGATGGCAAGTCTCTTCATCATTTCATKAAGTTTTGGGCCACACTTTGCAAGGAGATAGTAACAAAAGGAGGTAATKACTTAGGCTCCTTTCTTGAAGGGTCRAATAGTAATTTAACCCTACCTTCCCATGATAGAAACATGGTTAAYGACCCAAAAGGGCTGAAGCAAGTTTTCTTGGAAGAGCTGAAAAAATCTTATTTTGAGAGCTTGGAATTCCGAGGGCTTGTGAAAGATGTTTCTACCAACAAGGCACGTGGTACGCTCGTGGTGACACGTGACCAAGTTGACAAATTAAAAAAATGGGTGTCGCTTAAATATAGCGACACCTATGGTGATAACTGTGAGTCATTGCAACACATTTCAACCTTTGTTGTCACAAGCTCTTTGGTTTGGGTTAGTATAATGGAATCAGAAGAACAATGCAATAATAATAAGTATGATGAAAATTGCCATTTGGTGTTTCTAGCTGATTGCCGTGGCCATGTTGAATTTTGTGTACCTCAAAATTACTTTGGAAATTGTCTAGACTCTGGGTTTGTGACATTCAAAAGGGGTGACATATTAGGAGAAAATGGGATTGTTAGGGTGGCAAGTGCAATTGAGAGTGAAATTAGAGAGTTGAAAAGAGAAGCATATAGAGATGGTGAAAATGTGATGGAAAGGTATAAGGAATTAGCTACGTCTGGAGAAAGTTTAATCATAGTTGCAGGGTCACCAAGGTTGGGAGTGTATGAAACTGATTTTGGATGGGGGAAGCCTAGGAAATCTGAAGCGGCACATCTTGAATCATCAGGGTCAATTTCTCTTTCTGATAGTAAGAATAAAGAAGGGGCGATTGAAATTGGATTTTCACTTGAATGGCCTCGAATGAATCTATTCATCAACATCTTTGAACAACACATCAAAAGTGTTCATCAAACTTTGTCAATGATGACCAATTTGAATTGA 1482 0.4136 MAPENDNYDEVKIIENCQVAPPQGSLPSTTLPFTFFDIQWFLCHPVKRIFFYDFPYPTNHFLQASLPPLKHSLSLTLQHFFPFASKLIWPPPPHEPFMRYHQGSDSVTFTVAESKADFNLLVSDSPQNARDWHPFVPSLPPQDTLENGTRVIPXMAIQVTMIPNSGFAICLTFNHLVADGKSLHHFXKFWATLCKEIVTKGGNXLGSFLEGSNSNLTLPSHDRNMVNDPKGLKQVFLEELKKSYFESLEFRGLVKDVSTNKARGTLVVTRDQVDKLKKWVSLKYSDTYGDNCESLQHISTFVVTSSLVWVSIMESEEQCNNNKYDENCHLVFLADCRGHVEFCVPQNYFGNCLDSGFVTFKRGDILGENGIVRVASAIESEIRELKREAYRDGENVMERYKELATSGESLIIVAGSPRLGVYETDFGWGKPRKSEAAHLESSGSISLSDSKNKEGAIEIGFSLEWPRMNLFINIFEQHIKSVHQTLSMMTNLN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0943 493 Pfam Transferase family 11 476 - -
Amo18g0943 493 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 11 483 - -
Amo18g0943 493 PANTHER - 11 483 - -
Amo18g0943 493 Gene3D - 10 248 IPR023213 -
Amo18g0943 493 Gene3D - 258 482 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0943 Amo-Chr18 14217384 14219349 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0943 49 471 Monolignol Biosynthesis Gene Families AT5G48930 21.124 2.15e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0943 - - ahf:112707065 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0943 18 14217384 14219349 Amo18g0943 18 14217384 14219349 ECH