Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0909 ATGCGAACTACTCTTGTAGTTTTCCTTGTTTCATTGCTGCAATGCACTTCTCAAGTGGTTGTAGCAAAAGATATTATGGAGTCTGGCCAAAACATAACTTCAGAATCTTCATCAAGCTTTCTTGTTTCAGCTGGACAGAGATTTGTACTAGGCTTCTTTCCTCGTCCCGAAAACAKATCAGAAAGTTACCTGGGGATATGGTACAACAWTYATCAAARACAATACCCTGGAAAACAAACAGTGGTATGGGTTGCCAACAGAGACATTCCTGTTGTGAGTTCCAATGTTGGAGTCTTTCATATTGCAGATGATGGAAACCTTGTACTAGAAGATGCATCGAGTAAAWGACGCTATTGGTCCACATCAATAAGCTCTGCATCCACGGCGACGAACAAAACAAGGAGAGTGCAGCTAATGGATTCTGGGAATCTGGTATTGTTCCATGAAGAAGAAGATGGAGATTACATATGGCAAAGCTTCCAACACCCCACAGACACGTTTCTTCCGGGAATGCAGATGGACATGGATGGCATGGAATTAAGGAGTGGAAACTTCACCTTCAAGATGGTTCCAACTCAAAATTATCGGAAGAAGCGTTATGTCATCTACTTGAATGATCAACAACTCTATTGGGAAAATGATGGACTCAATTCAGATGCACTGAGCCCTGACAAACTCGAATATTTAACTAACTGGACAGAWATCGATATCCCTACGTCTTCACGTACGAAAGGTGTGAATCGGACGATGAAACTTTCAGCCACTATGAACAAATCCAGCACTGGGACCTGGGAAACCTTTTATAAGAAATACATGAACACAAGAATTGTGATGAARTCTTCAGGGGAGATACAGTATCTGAAGTGGGAAGAGGAAGACTCTACAGGTGCAGGATGGACGATGTTATGGAGGCAGCCATCGGACAAGTGCCATATATATAATTTTTGCGGCAACTTTAGTAGCTGCGACATTGCAGATGATTRGAGGATCTGCAAATGTTTACCAGGGTTTAAGGAGAATCAGATTCAGAGCWATGAGGGAGGGTCCAGATTCCCAGGATGTAACAGAAGTACACTATCACTGTKTGACAGCAGAGGCATGATGTTCATTAACTTGACCATGGTGAGAGTGACCGCACCAGACTTCAAATCCCCCGCAGAAAGCGAAGATGAATGCCGGATTTCGTGCCTTCACATGCATCTTCCCCGGTGCCAAGCTTATTCGTATAATCGCTCTGTTTCAGATTATGATCGTWTTCCTCTCACATGTGGAATTTGGACACAGGATTTAACTACTCTTCAAGTGGTCCAAGATGATGGTGCTGCTACTGCTTCTCTTTCTGTTCTGGTCAACCGTTCAGATATAGCACCAAAGGCAAAATCATGTGAGCCTTGTGGTATATACGTAATTCCTTATCCCCTAAGCACTGGACCAAGCTGTGGGGATGCCACCTACAACAAGTTCATCTGCAACAACTCAACAGGGCAGCTTAACTTCACAATCCCCAGTGGAGAATCGTACCGAGTTACTTGGGTAGACCAAAATACRAGAAGGTTTTACATTCAAACCAGCAATTCTTATCGCTGTGATTCCAGCAGTCAAAATAGAGTCCRTGATCCTCCCTTTAATGTCACCAACTGGTGCTACGGAGCAGATGAAATTGAGGTCAGTTGGGATCCAGCGCCAGAACCCCCCTGTAATCACCTCACAGACTGCAATGGTTGGCCTCATTCAACATGCCGACAKAAATTTCATCCAGGGGAAAAGAGGTGCTTTTGCCATTCAAAATATCACTGGGATGCCTCAACTCTTAGTTGTACTCAAGGAGAGGAATCAAAAAACCACAAATTGCTATTGGTTGTAACTCTTACKGTCATGCTTTTGCTAGCATTTCCAGTGATATTTGCATATGTATGGAGAATCAAGACAAACCCCAAGATTGACAGGGCGAACATTCTAATACAGGAGAGCTTGCATGATAGTGAAAGACAAGTCAAAGGTTTGATAGGTTTGGGAGGTTTAGAAGACAAACACAGTGAAAGCATTGKAGTGCCTTTTTATACTTACAGAAGCATTGTAGCAGCTACTGATAATTTCTCTGAGTCAAACAAGCTTGGAAGAGGAGGTTATGGACCAGTCTACAAGGGAAGGTTTCTCGGAGGCCAAGATATTGCTGTAAAAAGGCTTTCAAGTMTTTCAACACAAGGCTTAGAGGAATTCAAAAATGAGATTGTTTTGATTGCCAAACTCCAACATCGGAACCTTGTTAGACTCAGAGGCTATTGCATAAAGGGAGATGAGAAGATTTTACTTTATGAATACATGCCGAACAAGAGCTTGGACTCTTTCATKTTTGACCGTTCAAGAACTTTACTCCTTGAATGGCCAATGCGGTTTGACATAATCCTAGGCATTGCACGAGGATTGCTTTATCTTCACCAAGACTCTAGACTAAGAATAATTCATAGAGATCTAAAYTCTAGCAACATTCTTCTAGATGAGGATATGACTCCAAAGATTTCAGACTTCGGCCTTGCAAAAATATTTGGAGGGAAAGAGACCGAAGCAAGCACAGAGAGAGTTGTGGGAACCTACGGATATATGGCACCAGAATATGCTTTGGACGGGTATTTTTCAATCAAYTCCGATGTTTTCAGCTTTGGTGTAGTCTTATTAGAGATTCTCAGTGGAAAAAAGAACACAGGATTCTTTCAATTCAAACAAACTGCTACCCTTTTGGGATATGCATGGGGACTATGGACAGAGAATAGYCTTATGAATTTAATGGATACATCTTTCAGTGGAACTTGCAATGAGAATCAATTTACWAAGTGTGCACAAATTGCACTCTTGTGTGTGCAAGATGAACCAYGTGATCGACCAACCATGTCAACTGTTGTGACAATGCTTGATAGCGAAATTGCAACCATCCCTATTCCTACGCAACCAACATTTTATGCAATTAGAAGGACTACAAGCACTACTGCATCTTCTTCGAGCAGACCAGAAACAACCATGCAAATTGAGAGCAGTTATCAAGAAGGGAGATAG 3051 0.4182 MRTTLVVFLVSLLQCTSQVVVAKDIMESGQNITSESSSSFLVSAGQRFVLGFFPRPENXSESYLGIWYNXXQXQYPGKQTVVWVANRDIPVVSSNVGVFHIADDGNLVLEDASSKXRYWSTSISSASTATNKTRRVQLMDSGNLVLFHEEEDGDYIWQSFQHPTDTFLPGMQMDMDGMELRSGNFTFKMVPTQNYRKKRYVIYLNDQQLYWENDGLNSDALSPDKLEYLTNWTXIDIPTSSRTKGVNRTMKLSATMNKSSTGTWETFYKKYMNTRIVMKSSGEIQYLKWEEEDSTGAGWTMLWRQPSDKCHIYNFCGNFSSCDIADDXRICKCLPGFKENQIQSXEGGSRFPGCNRSTLSLXDSRGMMFINLTMVRVTAPDFKSPAESEDECRISCLHMHLPRCQAYSYNRSVSDYDRXPLTCGIWTQDLTTLQVVQDDGAATASLSVLVNRSDIAPKAKSCEPCGIYVIPYPLSTGPSCGDATYNKFICNNSTGQLNFTIPSGESYRVTWVDQNTRRFYIQTSNSYRCDSSSQNRVXDPPFNVTNWCYGADEIEVSWDPAPEPPCNHLTDCNGWPHSTCRXKFHPGEKRCFCHSKYHWDASTLSCTQGEESKNHKLLLVVTLTVMLLLAFPVIFAYVWRIKTNPKIDRANILIQESLHDSERQVKGLIGLGGLEDKHSESIXVPFYTYRSIVAATDNFSESNKLGRGGYGPVYKGRFLGGQDIAVKRLSSXSTQGLEEFKNEIVLIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFXFDRSRTLLLEWPMRFDIILGIARGLLYLHQDSRLRIIHRDLNSSNILLDEDMTPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGYFSINSDVFSFGVVLLEILSGKKNTGFFQFKQTATLLGYAWGLWTENSLMNLMDTSFSGTCNENQFTKCAQIALLCVQDEPXDRPTMSTVVTMLDSEIATIPIPTQPTFYAIRRTTSTTASSSSRPETTMQIESSYQEGR* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0909 1016 Pfam D-mannose binding lectin 80 177 IPR001480 -
Amo18g0909 1016 CDD STKc_IRAK 705 971 - -
Amo18g0909 1016 Pfam S-locus glycoprotein domain 249 340 IPR000858 GO:0048544
Amo18g0909 1016 Gene3D Transferase(Phosphotransferase) domain 1 775 977 - -
Amo18g0909 1016 ProSiteProfiles Bulb-type lectin domain profile. 17 159 IPR001480 -
Amo18g0909 1016 MobiDBLite consensus disorder prediction 992 1016 - -
Amo18g0909 1016 SMART blect_4 23 163 IPR001480 -
Amo18g0909 1016 ProSiteProfiles Protein kinase domain profile. 699 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0909 1016 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 1014 - -
Amo18g0909 1016 ProSiteProfiles PAN/Apple domain profile. 354 448 IPR003609 -
Amo18g0909 1016 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 214 IPR036426 -
Amo18g0909 1016 CDD B_lectin 40 163 IPR001480 -
Amo18g0909 1016 Gene3D Phosphorylase Kinase; domain 1 674 774 - -
Amo18g0909 1016 SUPERFAMILY Protein kinase-like (PK-like) 681 1008 IPR011009 -
Amo18g0909 1016 Gene3D - 17 161 IPR036426 -
Amo18g0909 1016 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 1014 - -
Amo18g0909 1016 Pfam Protein tyrosine and serine/threonine kinase 702 970 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0909 Amo-Chr18 13440892 13445377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0909 687 985 Receptor kinase-like Gene Family AT4G05200 55.853 8.22e-118 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g0909 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0909 - - aip:107612578 2004.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0909 18 13440892 13445377 Amo18g0909 18 13440892 13445377 ECH
Amo18g0909 18 13440892 13445377 Amo08g1136 08 18924459 18926477 hybridization
Amo18g0909 18 13440892 13445377 Amo13g1920 13 28900383 28904956 PCT