Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0887 ATGAAGTTTACAAGACCTGTTTATGCTGTTTTTTTTGTCTTTCTTCTTTGTACCTTGGCCAAAATCGGCTTTGAAGGGAAACTGTGGAAACCCCAAGAGTTTTATGCAGATCATGGTGTTGTAATTAAGGAAGAGCAGGAGTGGATACATTGCAGGAAGGAATTGATAGAGAGGAACAATGATATTAAGGACTATGACTTGGAATCAAAAACAAACTTATTAGATTGCATTACAAGGACACATCCTCCAACTCATGATTCAGAAGAGAAGGAGCTTGATCATGTGTCAGTGTCACAGTTTTATTCCGAAGACAATCGCGGTAGATACTTGCTTGACAAGTTACCTCAGAGTGAGAAGAAACTACCAAGACCTGTTCCTGTTCCATCACCCAAAAAACTGCGTGTCAAGAAGAAGTTTGCCAACTCGCTTCCGCCTAAAGGGATAACACTAAGTGACATTTCTCCTTCTCCAAATTCTCCACCTATAGACTTTTATGTGCTATTTCCACCACCACCAGATTCACCTCCCCCTCCTCCTCCTCCTCAAGTTGATGAGGAGGATAATAGCGAACGAAAGATACCAATTATCATTGGTTCGGTTGTGTCAGGAATAATAATCATAGTAGGCATGCTCTTATGCTATCGTGAGATCAGGAAAAGCAGAAAAGCCTACAAAGATGACAGGCCTTTAACTGTATTAGGCTCAAGTGATGTGTCTGGTTCAAAGAAGTTTATTGCTTTGGGAAATTCTAATACCAATGAAAATGGTATAATCTATGGAAAGAACCCTTCTATTGTTGGGAATGTTACCACTAGTCCTGAAGATAACAATGCCTCATTGGGTATGGGTGTTGGTGTGGGTTTGGGTGTGGCTGCGGGTGAGGCCTCATCATCAGAAAGCAAGGAACAAGTTCCATTAGGTCCTGCTCCAGAAGGATTAGCCCCTGAGCCGGCAGGGCCACCACCCCCACCACCTCCACCACCTCCACCCCCTGCTGCTGCGCCTCGCCCCCCACCGGCTCCAAAAGCACCTGTTAGGCCTCCACCTGCCCCTCCTGTTAAAATCCTTTCACGGGCACGTCTTAGTAATGTRGAAGAGGATTCKGCGGATGCTCCGAAAGCGAAACTAAAGCCATTTTTCTGGGATAAGGTTGCTGCATCTCCTGATCAAGCAATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTCAATGAACAGAAAATCGAGTCTTTATTTGGCTGCAACAACCCCAATAGAAAAGAGTCAACATCACAAGAACCTTCATTACAGTTAATTCAGATTATTGATCCTAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTTTGAATGTGACTACAGAAGAAGTTGTTGATGCCCTTAGAGAAGGTAGCGAGATTCCTGTTGAGCTGATCCAAACATTAATAAAGATGGCGCCAACAACAGATGAGGAACTGAAGCTGAGGTTATTTGATGGAAACATTGCTCAACTTGGCCCTGCAGAGCGGTTTCTCAAGGTCTTAGTTGACATTCCACTCGCTTTCCGACGTCTCGAGTCTCTACAACTCATGCTCACTCTTCCAGAAGAGGTCTCAAGCATCAAGGAGTGCTTTTCAACATTAGAGGTTTCATGTGATAAACTAAGAAAAAGTAAGCTTTTCCTTAAACTACTAGAAGCAGTTCTCAAGACAGGAAACAGATTGAATGATGGAACATATCGCGGCGGCGCTCAGGCCTTCAAGCTTGACACACTTTTGAAGCTTTCGGACGTAAAAGGAACCGATGGAAAGACAACACTTCTACACTTTGTGGTTCAGGAGATCATACGTTCAGAGGGAGTAAGAGCTTTGAGAACAGAGAGAGCGAGGCAGAGCAATTCTAGTGTCAGAACAGAGGATTCTGTTGATGATTCCATTGATCAAGAATCAGAAGAACACTACCGAAGACTTGGCCTTAAAGTAGTTTCAGGCCTAAGCAGTGAACTTGAAGATGTTAAAAGGGCGGCAATTATAGACGGCGATGCTCTAACGGCTGCAGTGTGGAAACTTGATCGGTTACTCAGCAAAAGTGAGGAGTTATTGAACAATGATTTGAAGAGCATAGATGAAGACAGCAACTTCAAGCGTTCCCTTGAAAATTTTGTGGACAAATCAAAAGCTCAAGTGTCATGGCTGTCTGAGGAAGAGAAGAGGATCATGGCTGAAGTGAAGGCTACAGCAGATTACTTCCATGGACAAGCAGGGAAAGATGAAGGCTTGAGATTGTTTGTAATTGTTCGCGATTTCTTGGTAATGTTGGACACAGTATGCAAAGAGGTGCAGTTAACAACACAGAAGCCAATGAAGATCTCTCATAAGAAAGAGGCTTCAAATTCGTCGTCGCCGCCAGTATCTCCGAATACTCAGCAGCAGTCTCCTTCTGATCTGCATAGAAGACTGTTTCCGGCCATAGCAGCGCGCAGGATCCATTGCTCTAGTTCAGATGAGGATGAGGATGAGGAAGAGGATAATTAG 2517 0.439 MKFTRPVYAVFFVFLLCTLAKIGFEGKLWKPQEFYADHGVVIKEEQEWIHCRKELIERNNDIKDYDLESKTNLLDCITRTHPPTHDSEEKELDHVSVSQFYSEDNRGRYLLDKLPQSEKKLPRPVPVPSPKKLRVKKKFANSLPPKGITLSDISPSPNSPPIDFYVLFPPPPDSPPPPPPPQVDEEDNSERKIPIIIGSVVSGIIIIVGMLLCYREIRKSRKAYKDDRPLTVLGSSDVSGSKKFIALGNSNTNENGIIYGKNPSIVGNVTTSPEDNNASLGMGVGVGLGVAAGEASSSESKEQVPLGPAPEGLAPEPAGPPPPPPPPPPPPAAAPRPPPAPKAPVRPPPAPPVKILSRARLSNVEEDSADAPKAKLKPFFWDKVAASPDQAMVWHEIRAGSFQFNEQKIESLFGCNNPNRKESTSQEPSLQLIQIIDPKKAQNLSILLRALNVTTEEVVDALREGSEIPVELIQTLIKMAPTTDEELKLRLFDGNIAQLGPAERFLKVLVDIPLAFRRLESLQLMLTLPEEVSSIKECFSTLEVSCDKLRKSKLFLKLLEAVLKTGNRLNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRALRTERARQSNSSVRTEDSVDDSIDQESEEHYRRLGLKVVSGLSSELEDVKRAAIIDGDALTAAVWKLDRLLSKSEELLNNDLKSIDEDSNFKRSLENFVDKSKAQVSWLSEEEKRIMAEVKATADYFHGQAGKDEGLRLFVIVRDFLVMLDTVCKEVQLTTQKPMKISHKKEASNSSSPPVSPNTQQQSPSDLHRRLFPAIAARRIHCSSSDEDEDEEEDN* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0887 838 Pfam Formin Homology 2 Domain 369 767 IPR015425 -
Amo18g0887 838 PANTHER FORMIN-LIKE PROTEIN 1 833 - -
Amo18g0887 838 SMART it6_source 366 782 IPR015425 -
Amo18g0887 838 Gene3D Formin, FH2 domain 371 801 IPR042201 -
Amo18g0887 838 MobiDBLite consensus disorder prediction 310 353 - -
Amo18g0887 838 PANTHER FORMIN-RELATED 1 833 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo18g0887 838 SUPERFAMILY Formin homology 2 domain (FH2 domain) 321 780 - -
Amo18g0887 838 MobiDBLite consensus disorder prediction 782 813 - -
Amo18g0887 838 MobiDBLite consensus disorder prediction 112 188 - -
Amo18g0887 838 MobiDBLite consensus disorder prediction 162 183 - -
Amo18g0887 838 MobiDBLite consensus disorder prediction 292 353 - -
Amo18g0887 838 MobiDBLite consensus disorder prediction 788 810 - -
Amo18g0887 838 ProSiteProfiles Formin homology-2 (FH2) domain profile. 366 793 IPR015425 -
Amo18g0887 838 MobiDBLite consensus disorder prediction 621 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0887 Amo-Chr18 13022301 13026494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0887 320 823 FH2 protein (formin) Gene Family AT5G54650 55.277 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0887 - - lja:Lj3g3v2888350.1 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0887 18 13022301 13026494 Amo18g0887 18 13022301 13026494 ECH