Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0866 ATGGGGTGTTGTGTCTCAACAAGCAGTAAGAGCAGTTGTAGTAGTAAGAGCAATGGAGACTCAGACTCTCCATCTTGTTTAGAAATCGGTTTCTGTGGTCAAAAGAAAGCAAGGAGAACATTCTCTGATCATGTTGTTTCCCTGCATCAGTTATCATCCTTACCAAACAGGATTTTCTCCAATGGAAAGAGCCGGTCTTCTTGCATATTTACGCAGCAGGGTCGTAAGGGTGTTAATCAGGATGCCATGATTGTATGGGAAGATTTCATGGCAGAAGATGTGACCTTCTGTGGTGTATTTGATGGCCATGGTCCTCATGGTCACCTTGTTGCACGCAAAGTTAGGGATTCCCTGCCTATCAAACTTCTTTCTTTTTTGCATTCCGGTGAATCGAGGCGAAACGGATCAGGGAAAGCTTCTTTCAAAGGGAATATAAAGCCTGACACTGAAGAGTCTGAGAAAGATAGCTCTGATGAGGATAAAATAAATTCCATGTGGAGAGAAGCTTTCATGAAGGCATATAAGGCCATGGACAAAGAGCTGAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACGGCTGTAACTATAGTGAAGCAGGGATCAAATCTGTTCATGAGCAACATAGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAATTGATTTGAAACCTGATTTGCCAAGGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTCACCGGCATCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGAGTCTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCACGGCACCAACTCGAGCATCAGCAGCAAGGGTTCTGGTGGATTCTGCGGCCCGAGAGTGGAAACTCAAGTATCCCACGTCAAAGATGGATGATTGTGCTGTTGTATGCCTTTTTTTGGATGGTAAAATGGATGCGGAATCTGATTGTGATGAGCAATGCTATTCTTCTGCAACAATCCAAAGCAACCATTCGGGTAATCCAGTTGAGTCGGATGACGGTCAAACAGCCGAGCCTTCTTTGCAAAGGAACTTCACTGTACGAACCTCAGTAGAAAATCAAACCTATGGAGGAATATCTGTTGATGGTGAGGATGGAGCTTCAGCAGCAGCAGCAGCTGAAGATCAGAATTGGTCGGGTTTGGAAGGTGTCACCCGAGTAAACTCATTGGTCCAACTTCCTAGATTTTCTGAGGAAAAGCAAAAGCAAGCCTCATAG 1428 0.4475 MGCCVSTSSKSSCSSKSNGDSDSPSCLEIGFCGQKKARRTFSDHVVSLHQLSSLPNRIFSNGKSRSSCIFTQQGRKGVNQDAMIVWEDFMAEDVTFCGVFDGHGPHGHLVARKVRDSLPIKLLSFLHSGESRRNGSGKASFKGNIKPDTEESEKDSSDEDKINSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSHRHLTDKDEFIVLASDGVWDVLSNEEVVEIVSTAPTRASAARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDAESDCDEQCYSSATIQSNHSGNPVESDDGQTAEPSLQRNFTVRTSVENQTYGGISVDGEDGASAAAAAEDQNWSGLEGVTRVNSLVQLPRFSEEKQKQAS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0866 475 MobiDBLite consensus disorder prediction 389 427 - -
Amo18g0866 475 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Amo18g0866 475 MobiDBLite consensus disorder prediction 1 24 - -
Amo18g0866 475 MobiDBLite consensus disorder prediction 144 161 - -
Amo18g0866 475 Pfam Protein phosphatase 2C 139 348 IPR001932 -
Amo18g0866 475 MobiDBLite consensus disorder prediction 130 161 - -
Amo18g0866 475 CDD PP2Cc 65 370 IPR001932 -
Amo18g0866 475 Gene3D - 56 372 IPR036457 -
Amo18g0866 475 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Amo18g0866 475 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 461 - -
Amo18g0866 475 SMART PP2C_4 55 368 IPR001932 -
Amo18g0866 475 MobiDBLite consensus disorder prediction 389 448 - -
Amo18g0866 475 PANTHER ALPHABET, ISOFORM E-RELATED 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0866 Amo-Chr18 12668273 12671755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0866 1 472 PP2C-type Phosphatase Gene Family AT1G03590 69.958 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0866 - - gmx:100813306 794.267