Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0858 ATGGGTGAGAAGAGATCTGCTTCAAAGTACAAGAGAGTGAAGATCCATGAACTAGTTCTTTTGGGATTTGTTTTGATCTGCACTGTTCAATTTTCATTTGCTGACACTAATCCTAGTGATGTTGCTGCAATCAATGGCCTATATACTGCATTGGGAAGCCCTCCTCTTCCTGGGTGGGTTTCGAGTGGCGGAGACCCTTGTGCACAAGGGTGGCAGGGTGTTCAATGTAATGGCTCAGTCATACAAGAAATAATTTTGAATGGTGCAAATTTGGGAGGAGAACTGGGTGAAAGCTTGGGATCCTTTGTTTCTATCAGAGCAATAGTTCTAAATAACAACCAGATTGGGGGAAGTATTCCGTCCAGTTTGCCAGTCACCTTGCAAAACCTTTTTCTTTCAGACAACCAGCTCACCGGAAGTATTCCTCCCTCGTTATCCTCATTGCCTGAACTGACTGACATGTCTCTCAATGACAATCTTTTAACAGGAGAAATACCAGATTCTTTTCAGTCACTTCAGAAATTGATCAATCTAGATTTATCCAATAATAATCTGAGTGGGGAGTTGCCCCCAACTATGGAGAATTTATCAGCTCTGACCTCTGTACATTTACAGAACAACAAACTGTCCGGGACCCTGGACGTTTTACAAGACCTTCCACTGAAAGATTTGAATGTTGAAAACAACCAGTTTGCCGGACCAATACCTCAAAAGCTATTAAGCATCCCTAACTTCAGAAATGATGGAAATCTGTTTAATACTACTTTAGCTCCGTCTCTTCCACCTCGTTCTCCGGGGACACCATCACCATCAGGAACTGTGGTTTCTGGGGTGCCATCTTCTTCTGGACGCATACCAACTAAACAGGCTGATGGACCAACTGCAGCAAAGGAATCAAATTCAGGGAAGTCAAAAGGGAGAACCAAAAGGGTTGTTTGGATAACCATTGCTAGTATACTAGGAGCTGTTATTGTGGCACTTGCGCTCCTTCTATTTGTTCCACACTGTAGAAGAAGGGAACAAGTTGACAGAACTTCCAAGAAACATCAAATTGGTGCTTTTGGAGGTGAAGCCCAGAATCCTAGAAACTATGAAGCCATGGTTCAACCACCTAGTCAAGCTGAGAAATTACCAAAAGGAGCTGCTGTGAAGCCTAAAGAGAAGCACAATGCAGATACCAGGAAAATGGCTACTACTCCAAGGCCACAAGATGATCAAGATGTGCAAAAAATGGAACCATTACCCAAGCTTTTGGTTGATCATGAGATTGATATGAGTGGAATAGATTCATTTTCAATGCCTTCTCCACCCCTACCCCCACCATCTCCGCCACCGGTTGCTGAGAGGGTGATTGTTGAGCCAGCTAAATTCCATGCAGAGGCTAACACCAATACTTCCAACAAACGTCCGGTTCTTCCCATTTTTGCGAAATCTTTCACCATTGCATCACTTCAACAGTATACAAATAGCTTTTCTCAAGAGAATCTTATAGGATTGGGCATGCTGGGGAGTGTGTATAGGGCAGAGCTTCCTAATGGAAAGATACTTGCTGTCAAGAAACTAGACAAGAGAGTTTCTGATCACCAGAAGGACGATGAGTTTCTTGAATTGGTAAATGGTATTGACAAAATACGGCATGCAAATATTGTTGAACTCATTGGATACTGTGCAGAGCATGGCCAAAGGCTTCTGATTTATGAATACTGCAGTAACGGATCACTCCAGGATGCAATCCATTCAGATGATGAATTTGGAACAAGATTGTCATGGAATACTCGTATTCGGATAGCACTAGGAGCTGCTAGAGCCTTAGAGTATTTGCATGAGCAATGTCAGCCACCAATTGTGCACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATCTATCTGTCCGCATCTCTGAATGTGGTTTGGCTCCATTGATAACTTCGGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAACAGCCTATGGCTACGGGGCTCCAGAATTTGAGTCCGGAATTTACACCTACCAAAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACTGGCCGAAAGTCCTATGACAGGTCGCGCCCTCGAGGGGAGCAGTTTCTGGTAAGATGGGCTATTCCTCAACTTCATGATATTGATGCATTATCAAGGATGGTTGATCCTTCTCTAAACGGAGAATACCCTGCGAAATCATTGTCGAATTTCGCAGACATTATCTCTCGATGTGTTCAGTCAGAGCCAGAATTCAGGCCAGCAATGTCAGAGGTTGTCCTGTACTTGCTAAACATGATAAGGAGGGAATCTCAGCAATCCGAATCAAGCGAAAAATGA 2346 0.4331 MGEKRSASKYKRVKIHELVLLGFVLICTVQFSFADTNPSDVAAINGLYTALGSPPLPGWVSSGGDPCAQGWQGVQCNGSVIQEIILNGANLGGELGESLGSFVSIRAIVLNNNQIGGSIPSSLPVTLQNLFLSDNQLTGSIPPSLSSLPELTDMSLNDNLLTGEIPDSFQSLQKLINLDLSNNNLSGELPPTMENLSALTSVHLQNNKLSGTLDVLQDLPLKDLNVENNQFAGPIPQKLLSIPNFRNDGNLFNTTLAPSLPPRSPGTPSPSGTVVSGVPSSSGRIPTKQADGPTAAKESNSGKSKGRTKRVVWITIASILGAVIVALALLLFVPHCRRREQVDRTSKKHQIGAFGGEAQNPRNYEAMVQPPSQAEKLPKGAAVKPKEKHNADTRKMATTPRPQDDQDVQKMEPLPKLLVDHEIDMSGIDSFSMPSPPLPPPSPPPVAERVIVEPAKFHAEANTNTSNKRPVLPIFAKSFTIASLQQYTNSFSQENLIGLGMLGSVYRAELPNGKILAVKKLDKRVSDHQKDDEFLELVNGIDKIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDAIHSDDEFGTRLSWNTRIRIALGAARALEYLHEQCQPPIVHRNFKSANILLDDDLSVRISECGLAPLITSGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRKSYDRSRPRGEQFLVRWAIPQLHDIDALSRMVDPSLNGEYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRESQQSESSEK* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0858 781 SUPERFAMILY L domain-like 37 244 - -
Amo18g0858 781 PANTHER OS01G0253100 PROTEIN 24 780 IPR045271 GO:0004714|GO:0006468
Amo18g0858 781 Pfam Protein tyrosine and serine/threonine kinase 494 763 IPR001245 GO:0004672|GO:0006468
Amo18g0858 781 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 24 780 - -
Amo18g0858 781 Gene3D Transferase(Phosphotransferase) domain 1 569 781 - -
Amo18g0858 781 SUPERFAMILY Protein kinase-like (PK-like) 467 765 IPR011009 -
Amo18g0858 781 MobiDBLite consensus disorder prediction 253 307 - -
Amo18g0858 781 MobiDBLite consensus disorder prediction 341 409 - -
Amo18g0858 781 Gene3D Ribonuclease Inhibitor 38 262 IPR032675 -
Amo18g0858 781 MobiDBLite consensus disorder prediction 269 301 - -
Amo18g0858 781 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Amo18g0858 781 ProSiteProfiles Leucine-rich repeat profile. 126 149 IPR001611 GO:0005515
Amo18g0858 781 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0858 781 MobiDBLite consensus disorder prediction 380 409 - -
Amo18g0858 781 Gene3D Phosphorylase Kinase; domain 1 454 568 - -
Amo18g0858 781 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0858 Amo-Chr18 12526550 12530950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0858 31 779 Strubbelig Receptor Gene Family AT4G03390 61.408 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Amo18g0858 PK_Tyr_Ser-Thr 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0858 - - gmx:100811490 1109.75