Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0847 ATGCAACCTTCTAGCTACCTTGTTTTCTCTCCTTCAAACATGTCATCACATTTGTTATGTCTTTTCTTTTTTCTCTTCACTTCAAACGCTGTTGCCTCTGCCTTAGGAAATGAGAGTGACCATCTTGCACTGATCAAATTCAAAGATTCAATATCTAGTGACCCTTTTGGAGTGTTATCCACTTGGAACAGCTCAACCCACTTTTGCAACTGGCAGGGAGTCAAATGTGGCAGCAAACATCAGAGAGTCACAAAACTGACTTTAGATTTATACAATTTGCAAGGGTCAATATCACCGTATGTTGGCAACCTTTCCTTTCTTAGAGTCTTGAGCCTTCAGCTCAATAACTTCCATGGTCATGTTCCGCAAACAATAAGCCGTTTGTTTCGACTGAGGGCACTTGCTTTATATAGTAACAATTTAGTTGGGGAGTTTCCCATTGGTGCCACGAACTGTTCTAAATTAAAAACATTGATGTTAGACCACAATCATTTTAGCGGCCACATACCAGTGGAGATTGGGTTTCTTGGGAATCTTGAAAGATTGTTTCTTGTTTCAAACAATTTTTCAGGACCAATCCCATTATCAATGTGGAATTTATCTTCTCTTGTTCTTCTTAGTGCAGCTTATAATAATTTGGAGGGAAATATACCTGACGAAATAGGCCATTTGAAGGACTTAGTTAATATTTCACTGGGAGTTAATAAAATGTCTGGTAAGATTCCACACTCGCTTTACAATTTGTCATCACTCTCTGTCTTAACACTTTCATTCAATCAACTTGAGGGTTCTCTTCCAAGCAACATGTTCTCCAACCTCTCAAATCTCAGGATCATTGAACTGGCTGGGAACCAATTTTCAGGTCCTATACCAACATCCATCACAACTGCATTTGGCCTTCAAGAAGTTGATTTTTCTATCAACAATTTTGTTGGACAAGTCCCAAATCTAGGAAGCCTTCGAAATCTCTCAGTTCTAGATTTAGGTACAAATGATTTTGGAGGGAATTCATCTATTAATGAGTGGGAGTTCATAAAGTCTTTGATAAACTGTAGTAAGCTGCAAGAGTTTGGTTTCGAGTACAATAATTTTGTAGGTCATTTGCCAAATTTCATAGGCAATTTGTCCACCAAGATCAGCCAACTAGCATTTGGTGGAAATCAGATTTCCGAGCAAATTCCTACAGAATTAGGCAATCTTGTTAACTTAATTTCCTTGACAATGGAGAACAACCACCTAACTGAGTCCATTCCAACTTCTTTTGGTAACTTTCAAAAGTTGCAATATTTGGATATGAACAGTAACAAATTTTCAGGAGAAATACCCGCTATCATAGGTAACCTAAGCCAGTTGTCTGAGTTAGATTTGTCACATAATATGTTAAATGGAAACATTCCTTCAGCCATTGGAAATTGCAAGAGATTACAAAGTCTAGATTTTTCATATAACAACCTTAGTGGAATCATACCATCACAAGTATTTGAAATTCCATCTTTGTCAATCTTGTTGAATATTTCACACAACTCATTAAGTGGTAGTTTACCYAGTGAAATAGGCCTGCTTAAAAGTATTGGTACACTAGATGTTTCTGAGAATCATCTGTCRAATAAGATTCCGGAAGCAATAGGAGAATGTGAGAGTTTGGAGTACCTTTATTTGCAGGGGAATTCCTTTCATGGAATCATACCACCTTCTCTGGCTTCTCTAAAAGGTCTTCAACACTTAGACCTATCGCYGAATCAGTTGTCCGGAACAATTCCACAAGAACTGCAGAACATTWCTGTTTTGGTATACTTCAATGCTTCTTTTAACATGTTGGAGGGTGAGGTACCAATGAARGGCGTGTTCCGAAACACAACTGAATTATCATACCATCTTCAGTTGTGTTTCTTCTTTTGCTTTCATCAATTCTTGCACTCMTTTCTAGAAGAAGAAGACAAAGAAAAGCATCTGTATAATGCAACAAATGAGAAAGTGCCCAGAGTATCATATCAGAACCTATATAATGCAACAAATGGGTTCTCAAATGAGAACTTAATAGGATCCGGTGGTTATAGCTCTGTGTATAAAGCAATACTTGATTCTGCAGAAGAAGTTGTTGCTGTAAAGGTTCTAAACCTTCAACTGAAAGGAGCTCACAAAAGTTTCACGGCTGAATGCAATGCTTTAAGAAATATCAGGCACAGAAATCTAGCGAAGATTGTAACATGTTGCTCTAGTGTGGATTACAAGGGAAATGATTTTAAGGCTCTGGTTTACGAGTACATGTCGAATGGAAGCTTAGACAAATGGTTGCATGCCAATGGAGAAAGTTCGAACCAACTAAGAATGCTAAACCTGCAGCAGAGATTAGAAGTTATTAGGGGCGTTGCTTCCGCAATGCATTATCTTCACTATGAATGTGAGCAGCCAGTAATTCATTGTGATTTGAAGCCGAGCAATGTCCTTCTTGYAGATAACATGGATGCTCAAGTGAGTGATTTCGGTTTAGCAAGACTTATCCCAGTGGTTGATGGCAACTCTCAAAACCAAACCAGCACCAGTGGAATCAAAGGAACAATAGGTTATGCTCCTCCAGAATATGGAACAAGTTCTCAAGTGTCAATAGAAGGTGACATATATAGCTTTGGCATTCTTGTTTTGGAGATGCTAACCGGGAAAATACCAACAGAAGAAATGTTCAAAGATGGGTGTAGCCTCCACAACTATGTCCGTGATGCATGTCCAGATAATATCTTGGAGATTGTTGATACAACTCTGCTGTCATTGATAGGTGAAGAAATTCAAGCACCAACAGGTGTAGAAGAAAATAATCATATTGAGAATGAAGGACATTTGCAGAGTAATGTTGAGAACTGCTTATTCTCATTATTCAAGATTGGTCTTGCTTGTTCTGTGGACTCACCAAGAGAAAGGATGAACATGATGGAAGTCAATAGAGAACTCAACATTATCAAAAATAATTTTCATGCTTGA 2976 0.3797 MQPSSYLVFSPSNMSSHLLCLFFFLFTSNAVASALGNESDHLALIKFKDSISSDPFGVLSTWNSSTHFCNWQGVKCGSKHQRVTKLTLDLYNLQGSISPYVGNLSFLRVLSLQLNNFHGHVPQTISRLFRLRALALYSNNLVGEFPIGATNCSKLKTLMLDHNHFSGHIPVEIGFLGNLERLFLVSNNFSGPIPLSMWNLSSLVLLSAAYNNLEGNIPDEIGHLKDLVNISLGVNKMSGKIPHSLYNLSSLSVLTLSFNQLEGSLPSNMFSNLSNLRIIELAGNQFSGPIPTSITTAFGLQEVDFSINNFVGQVPNLGSLRNLSVLDLGTNDFGGNSSINEWEFIKSLINCSKLQEFGFEYNNFVGHLPNFIGNLSTKISQLAFGGNQISEQIPTELGNLVNLISLTMENNHLTESIPTSFGNFQKLQYLDMNSNKFSGEIPAIIGNLSQLSELDLSHNMLNGNIPSAIGNCKRLQSLDFSYNNLSGIIPSQVFEIPSLSILLNISHNSLSGSLPSEIGLLKSIGTLDVSENHLSNKIPEAIGECESLEYLYLQGNSFHGIIPPSLASLKGLQHLDLSXNQLSGTIPQELQNIXVLVYFNASFNMLEGEVPMKGVFRNTTELSYHLQLCFFFCFHQFLHSFLEEEDKEKHLYNATNEKVPRVSYQNLYNATNGFSNENLIGSGGYSSVYKAILDSAEEVVAVKVLNLQLKGAHKSFTAECNALRNIRHRNLAKIVTCCSSVDYKGNDFKALVYEYMSNGSLDKWLHANGESSNQLRMLNLQQRLEVIRGVASAMHYLHYECEQPVIHCDLKPSNVLLXDNMDAQVSDFGLARLIPVVDGNSQNQTSTSGIKGTIGYAPPEYGTSSQVSIEGDIYSFGILVLEMLTGKIPTEEMFKDGCSLHNYVRDACPDNILEIVDTTLLSLIGEEIQAPTGVEENNHIENEGHLQSNVENCLFSLFKIGLACSVDSPRERMNMMEVNRELNIIKNNFHA* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0847 991 SUPERFAMILY L domain-like 264 612 - -
Amo18g0847 991 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Amo18g0847 991 Gene3D Ribonuclease Inhibitor 33 96 IPR032675 -
Amo18g0847 991 ProSiteProfiles Protein kinase domain profile. 674 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0847 991 PANTHER OS04G0122200 PROTEIN 25 623 - -
Amo18g0847 991 PANTHER OS04G0122200 PROTEIN 645 990 - -
Amo18g0847 991 Gene3D Transferase(Phosphotransferase) domain 1 756 990 - -
Amo18g0847 991 ProSitePatterns Protein kinases ATP-binding region signature. 680 703 IPR017441 GO:0005524
Amo18g0847 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Amo18g0847 991 PANTHER LRR RECEPTOR-LIKE KINASE 645 990 - -
Amo18g0847 991 Gene3D Phosphorylase Kinase; domain 1 653 755 - -
Amo18g0847 991 Pfam Leucine rich repeat 402 461 IPR001611 GO:0005515
Amo18g0847 991 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Amo18g0847 991 SMART LRR_typ_2 569 592 IPR003591 -
Amo18g0847 991 SMART LRR_typ_2 273 300 IPR003591 -
Amo18g0847 991 SMART LRR_typ_2 448 472 IPR003591 -
Amo18g0847 991 SMART LRR_typ_2 400 423 IPR003591 -
Amo18g0847 991 SMART LRR_typ_2 521 545 IPR003591 -
Amo18g0847 991 SMART LRR_typ_2 104 128 IPR003591 -
Amo18g0847 991 SMART LRR_typ_2 248 272 IPR003591 -
Amo18g0847 991 SMART LRR_typ_2 320 346 IPR003591 -
Amo18g0847 991 SMART LRR_typ_2 200 224 IPR003591 -
Amo18g0847 991 Pfam Protein kinase domain 675 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0847 991 SMART serkin_6 674 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0847 991 SUPERFAMILY Protein kinase-like (PK-like) 655 984 IPR011009 -
Amo18g0847 991 SUPERFAMILY L domain-like 37 334 - -
Amo18g0847 991 Gene3D Ribonuclease Inhibitor 97 340 IPR032675 -
Amo18g0847 991 Gene3D Ribonuclease Inhibitor 341 632 IPR032675 -
Amo18g0847 991 PANTHER LRR RECEPTOR-LIKE KINASE 25 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0847 Amo-Chr18 12405177 12408466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0847 37 989 Receptor kinase-like Gene Family AT3G47570 43.214 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo18g0847 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0847 - - ahf:112742943 1821.98