Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0821 ATGATCATGGCTGCTCACACCACCACCACCACCACCAACAAGAAGCATGAGCAAGTGAAGATCATAGAAGAATGTAAAGTTGCACCACCAGAAGGGTCTCTTGCCTCCACCACCACCATTGTTCCCCTCACTTACTTGGATATCCCATGGTTCCTATGCCATCCGATTAAGCGCATCTTCTTCTATGACTTCCCTCACTCCACCAACCACTTCCTTCAATCATCACTCCCTCCTCTCAAACACTCCCTCTCCCTTTCCCTCCAACACTTCTTTCCATTCGCCTCCAACCTCATCGTACCTCCCTCCCCAAATCTCCCCTTCATCCGTTTTCTTGACGGTCTCGACTCACTCTCTTTCACCATTGCAGAGTCTAAAGCAGACTTTTCCTTACTCGTATCTGATTCGCCACAAGATGTTCGCTTTCTACACCCTTTGATCGCTTCTTTGCCACCTAAGGTTACCATGGAGGATGGTACGCTTGTTATGCCTCTCATGGCCATTCAAGTCACTGTTCTTCCAAACACTGCCTTCGCCATTTCTCTAACATTCAGCCATCTCGCCGCCGATGGCTACTCGCTTCATCATTTCATCAAGTTTTGGGCCAATCTTTGCAAGCAAATAATAACAAGAGGTAGTGGAACAAATGATGAAGATGTTAAAGAATCTAGTTTTTTGTCTCTTCCTTTTCATGATAGAGACATAGTTAAGGACCCGAAAGGGCTTAAACATGTTTACATGGAAGAGGTAAGAGATTTGCTGAGGAAGAACAACAACTTGATGAATTCTCAAGTCCCTGTCAATAGTAACACCATGGTACGTGCAACTCTTGTCCTAAACCATAGCCAAGTTGAGAAACTCAAGAAATTTGTGTCTCTTAAATACCGTGACACCTATGGTTCTAATACGTTATTACACATGTCAACGTTTGTGGTCACGTGTTCATTGATTTGGGTTTGCATGATGCAATCAGAAGAACAAACCGAAGGCAATCATCATCATAATAATAAGAATTTTGATGATGAAGTTTGCTATTTCATAATTCTAGCTGATTACCGTGGCCGTTCTGAGTTATCAATACCTTCAAATTACTTTGGGAATTGCTTATTGTCTGGATATGTGAGACTCAAGAGGGGTGAGCTAGTTGGAGAAAATAATGGTGATTGTTATCATGGGATTTTTGAGGCAGCAAGTGGAATTGACAGGGAGATTAGAAATCTGAGAAATGATGCATTAACAAGGGTTGAAAGTTTTGTCCCCTATGCTAGAGAATTAAATAAATGTCGTAGTATAACTGTGGTGGCAGGGTCCCCAAAATTAGGAGTTTATGAAACTGATTTTGGGTGGGGAAAGCCTAAGAAATCTGTAGCAGTTCATGTTGAATCAGCAGGAGCATTTTCTCTTTCGGATTGTAGGAACAACGAAGGAGCAGTTGAGATTGGAATTGCACTTGAGAGGATCCGAATGAAGAAATTCATCAAAATTTTCGAACAACACCTCCAAAACATCGATCATGATTTCCCTACGTAG 1527 0.4217 MIMAAHTTTTTTNKKHEQVKIIEECKVAPPEGSLASTTTIVPLTYLDIPWFLCHPIKRIFFYDFPHSTNHFLQSSLPPLKHSLSLSLQHFFPFASNLIVPPSPNLPFIRFLDGLDSLSFTIAESKADFSLLVSDSPQDVRFLHPLIASLPPKVTMEDGTLVMPLMAIQVTVLPNTAFAISLTFSHLAADGYSLHHFIKFWANLCKQIITRGSGTNDEDVKESSFLSLPFHDRDIVKDPKGLKHVYMEEVRDLLRKNNNLMNSQVPVNSNTMVRATLVLNHSQVEKLKKFVSLKYRDTYGSNTLLHMSTFVVTCSLIWVCMMQSEEQTEGNHHHNNKNFDDEVCYFIILADYRGRSELSIPSNYFGNCLLSGYVRLKRGELVGENNGDCYHGIFEAASGIDREIRNLRNDALTRVESFVPYARELNKCRSITVVAGSPKLGVYETDFGWGKPKKSVAVHVESAGAFSLSDCRNNEGAVEIGIALERIRMKKFIKIFEQHLQNIDHDFPT* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0821 508 PANTHER - 19 502 - -
Amo18g0821 508 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 19 502 - -
Amo18g0821 508 Gene3D - 18 261 IPR023213 -
Amo18g0821 508 Gene3D - 268 502 IPR023213 -
Amo18g0821 508 Pfam Transferase family 35 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0821 Amo-Chr18 11818175 11819773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0821 59 496 Monolignol Biosynthesis Gene Families AT5G48930 21.413 1.92e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0821 - - adu:107462106 988.408