Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0820 ATGGCTCCTGAGACCGACAACTATGGTGAGGTGAAGATAATAGAAAATTGTCAAGTTGCTCCACCACAAGGCTCTCTTCCCTCAACCACACTCCCCTTCACTTTCTTCGATATTCAATGGTTCCTATGCCACCCCGTGAAGCGCATCTTCTTCTATGACTTCCCTTACCCTACCAACCACTTCCTTCAATCATCACTCCCTCCTCTCAAACACTCTCTTTCCCTCACTCTTCAACACTTTTTCCCTTTCGCCTCCAAACTCATCTGGCCTCCACCACCCCACGAACCTTTCATGCGCTATCACCAAGGTAGCGACTCAGTTGCTTTCACGGTTGCGGAGTCCAAAGCTGATTTCAATCTTCTTGTATCTGATTCACCACAAAATGCAAGAGATTGGCACCCTTTTGTTCCTTCTTTGCCTCCACAAGATACCTTAGAGAATGGCACTCGTGTGATCCCTCTAATGGCGATTCAAGTAACCATGATACCGAATTCTGGATTCGCTATTTGTCTCACTTTCAACCACCTTGTTGCGGATGGCAAGTCTCTTCATCATTTCATCAAGTTTTGGGCCACACTTTGCAAGGAGATAGTAACAAAAGGAGGTAATCACTTAGGCTCCTTTCTTGAAGGGTCCAATAGTAATTTAACCCTACCTTCCCATGATAGAAACATGGTTAAAGACCCAAAAGGGCTGAAGCAAGTTTTCTTGGAAGAGCTGAAAAAATCTTATTTTGAGAGCTTGGAATTCCGAGGGCTTGTGAAAGATGTTTCTACCAACAAGGCACGTGGTACGCTCGTGGTGACACGTGACCAAGTTGACAAATTAAAAAAATGGGTGTCGCTTAAATATAGCGACACCCATGGTGATAACTCTGAGTCATTGCAACACATTTCAACCTTTGTTGTCACAAGCTCTTTGGTTTGGGTTAGTATAATGGAAACAGAAGAACAATGCAATAATAATAAGTATGATGAAAATTGCCATTTGGTGTTTCTAGCTGATTGCCGTGGCCATGTTGAATTTTGTGTACCTCAAAATTACTTTGGAAATTGTCTAGACTCTGGGTTTGTGACATTCAAAAGGGGTGACATATTAGGAGAAAATGGGATTGTTAGGGTGGCAAGTGCAATTGAGAGTGAATTAGGCAATATGATAATATATGTAATGAGACCACTATTATTATTGTTCTGA 1194 0.4229 MAPETDNYGEVKIIENCQVAPPQGSLPSTTLPFTFFDIQWFLCHPVKRIFFYDFPYPTNHFLQSSLPPLKHSLSLTLQHFFPFASKLIWPPPPHEPFMRYHQGSDSVAFTVAESKADFNLLVSDSPQNARDWHPFVPSLPPQDTLENGTRVIPLMAIQVTMIPNSGFAICLTFNHLVADGKSLHHFIKFWATLCKEIVTKGGNHLGSFLEGSNSNLTLPSHDRNMVKDPKGLKQVFLEELKKSYFESLEFRGLVKDVSTNKARGTLVVTRDQVDKLKKWVSLKYSDTHGDNSESLQHISTFVVTSSLVWVSIMETEEQCNNNKYDENCHLVFLADCRGHVEFCVPQNYFGNCLDSGFVTFKRGDILGENGIVRVASAIESELGNMIIYVMRPLLLLF* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0820 397 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 11 385 - -
Amo18g0820 397 Pfam Transferase family 11 386 - -
Amo18g0820 397 Gene3D - 10 248 IPR023213 -
Amo18g0820 397 Gene3D - 258 389 IPR023213 -
Amo18g0820 397 PANTHER - 11 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0820 Amo-Chr18 11812496 11814224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0820 49 368 Monolignol Biosynthesis Gene Families AT5G48930 22.388 1.38e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0820 - - ahf:112707065 816.609