Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0816 ATGGCACAAATGGAAAATTCTAGCGATAATATTAATAAGCTAGTTGAGCATCAATTTCAAGTTGGTGTAGTAGCATCCATTGAAAATGATGCCAAAATCAATAATAAGTCTTTTCCCCTCACATTCCTTGACATACCTTTAGCTGGTCCAATCTATGTCAAACGCTTATTCTTCTACAAATTCCCTTTTTCCACCAGCCATTTTTACCAAACTACCCTTCCATATCTCAAGCGTTCTCTCTCACTCACCCTCCAAAGTTTCTTTCCTCTTGCCGGTAACCTCCTTTGTCCACCACCGCCACACAAGCCCTTCATTCAATGCACAAATGAAGACTCCGTGGCCTTCACCGTCGTCGAGTCTTCCTTGGATTTCAACCTTTTAGCAAGCAACAACCCAAAAAGCATCAATGATTTGCGTACCTTGGCTCCCAATCTGGTAGGCAAAGCCATGCATCATGATCATGATAGTGGTGACGACACACTCGTGTTTCCAATTTTGGCCTTGAAAGCCACGGTTTTTGCAAACCGTGGCGTTTGCATTGCCATAAATTATTGTCACGTGATGGATGATAGGTCTTGTGGCCAATTCATGAAATCTTGGTCTTCTCTTTGTGGAACAATAATAAGAAACGGTGAAGAAGTTGAATCAACGCTTCTAGACAAGTACCTACCACCACCGCCATGCTTCGATAGGGGAGTGTTGAAGGATCCGAAGGGACTCGAGTCCATTTTCTTGAATGATTATTTCGGTGAGTGGCAAACTTTCAAGGACAAAGTTGTTAGTCAAAGTCAAACTGGAAGTCTTCGAGCAGAAGAGGAAGAGGAATACGTTAAAGCAACAATCATATTTGGTAGAAAAGAGACAGAGGGAATGAAAAGGTTTGCGCTGAATGAGTTAAAGAAAAGCAACAGAAGCGAAGCGCCGCAATATTTATCATCTTTCGTTGTGACATGTGCTTTTTTATGGAGTACCCTGGTTAAAACAAAACACAGAGATGAAGAAGAGAATGATGCGAAAGAGGATTGTATTCGTTTCCCAGCTGATGTTAGAGAGCGTCTAGAGTATCCGATTGCGGAGAATTACTTCGGAAACTGCATAACGAGATGCCATGCAACGCTGAAGAGGAAGGAGCTGAAAGGGGAAGGTGGGTTTGTGAATGCGGCAAGGGTTATTGACAAGGCTGTAAACGACATGAAGGAGGAGCCGTTTTGGGGTGCGGAGAATTGGAAGTCAACGTTTATCAAGTTGTTTGTGTTGGGGAATAGTGGGTTGCTTGTGGCTGGGTCCCACAAGTTCGGTGTGTATGACACTGATTTTGGGTTTGGAAGGCCTGTTAAAGTGGAAATGCTGCATTCATTCAGAGTTATGTCCATTGCGGAGACTGGTGACACTGAAAAAGGAGGGATTGAGTTTGGGATGGTGTTTAGAAAAGCTGAATTCCAGAGTTTTCAAGATAAGCTTCAACAAGGACTTCAAGTCTTTGCTTAA 1488 0.4301 MAQMENSSDNINKLVEHQFQVGVVASIENDAKINNKSFPLTFLDIPLAGPIYVKRLFFYKFPFSTSHFYQTTLPYLKRSLSLTLQSFFPLAGNLLCPPPPHKPFIQCTNEDSVAFTVVESSLDFNLLASNNPKSINDLRTLAPNLVGKAMHHDHDSGDDTLVFPILALKATVFANRGVCIAINYCHVMDDRSCGQFMKSWSSLCGTIIRNGEEVESTLLDKYLPPPPCFDRGVLKDPKGLESIFLNDYFGEWQTFKDKVVSQSQTGSLRAEEEEEYVKATIIFGRKETEGMKRFALNELKKSNRSEAPQYLSSFVVTCAFLWSTLVKTKHRDEEENDAKEDCIRFPADVRERLEYPIAENYFGNCITRCHATLKRKELKGEGGFVNAARVIDKAVNDMKEEPFWGAENWKSTFIKLFVLGNSGLLVAGSHKFGVYDTDFGFGRPVKVEMLHSFRVMSIAETGDTEKGGIEFGMVFRKAEFQSFQDKLQQGLQVFA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0816 495 Gene3D - 23 260 IPR023213 -
Amo18g0816 495 PANTHER - 31 494 - -
Amo18g0816 495 Gene3D - 273 494 IPR023213 -
Amo18g0816 495 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 31 494 - -
Amo18g0816 495 Pfam Transferase family 27 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0816 Amo-Chr18 11740546 11742393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0816 52 445 Monolignol Biosynthesis Gene Families AT5G48930 20.782 1.05e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0816 - - adu:107461989 965.681