Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0813 ATGAGGTTTGCTTCCTTCTTCACAAGGGCTTTCCAACGCCATCCTTCCTGCTCCAAGATTCTTCTCTTATGCACTCTCAGTGGTGGAGGCTTGCTGTCATACTCAGAATCACAATCTGAATCTATTACTGGATCTCCTGCTTCTAATACGAATTCTGATGTGCCAGCAAAAAAGAAAGTGATTGTTCTTGGAACAGGATGGGGTGGTACTAGTTTTCTCAAGGATCTCGATGCATCCTTGTATGATGTTCAGGTTGTTTCCCCTTGTAACTATTTTGCATTCACTCCTCTATTACCTAGTGTCACTTGCGGAACCGTTGAAGCGCGAAGCATTGTAGAGCCAGTTCGAAACATGGTCAAAAAGAGAAAAGGAGACATTAAATTCTGGGAGGCGGAATGTCTGAAGATCGATCATGCAAACAAAACGGTATTGTGTAGGTCCAATATTGGGAACAACTTAGTTGGAAGTGGCGAATTTTCTTTGGAATATGACTACTTGGTTGTAGCGATAGGAGCACAAGTGAATACTTTTAACACCCCTGGTGTCAAGGAGCATTGTCATTTTCTAAAGGAGGTAGAGGATGCACAGAAGATCAGAAGGGCTGTGATAGATTGTTTTGAGAAGGCTGTTCTTCCATCTCTATCTGACGAAGAACGAAGGACAAATCTACATTTTGTTGTTGTTGGAGGAGGTCCAACTGGGGTGGAATTTGCTGCTGAGCTTCATGACCATTTCCAAGAAGATTTAGTCAATTTATACCCATCTGTTAAAGATTTTGTGAATATTACAGTGATTCAATCAGGAGATCACATCTTGAACACGTTTGATGAAAGAATTAGTCTATTTGCCGAAGAGAAGTTTGGAAGAGATGGTATAAAAGTTCAAACTGGACGTCGAGTTATCAGTGTTGATGACAAAAATATTACAATGAAGGCAAAATCAACTGGAGAGATCTACTCTGTACCCCATGGACTGGTTATCTGGTCCACCGGGATTGCAACTCGTCCGGTTGTGAGGGACTTTATGGAACAAATCGGTCAGGGTAAAAGACATGTGCTAGCAACAAATGAATGGTTGCGAGTGAAGGGTTGTGAATCTGTGTATGCTATCGGTGATTGTTCTTCAATAGATCAACAAAAAATAATGGATGATATTTCAGCCATTTTTGAGGCTGCGGATAAGGACAAATCCGGTACCTTAACTGTTGCAGAACTCAAGGATGTGCTAGATGACATAATTGTAAGATATCCACAGTTCGAACTGTATTTGAAGAGCAAACACATTTTGGATTTGAGTACTCTATGGAAAGACTCAGAAGGAAATTATAGAGAAGAAATAGACATAGAAGGCTTTAAGATGGCCCTTTCTCATATGGATTCACAGATGAAGAGTCTGCCAGCAACTGCACAGGTTGCTTCCCAACAAGGTGAATATCTAGCTAGATGCTTTAACCGCATGCATCAATGTGAAGAGCATCCGGAAGGTCCTCGGCGATTTAAAGGCTCTGGACGTCATACGTTTCTTCCCTTCCGGTATAAGCACTTTGGGCAATTTGCTCCTCTAGGAGGGGAGCAAGCTGCTGCAGAACTTCCTGGAGACTGGGTTGCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTAAGCTGGCGGACAAGGATGCTAGTCATATCAGATTGGACAAGAAGATTCATATTTGGAAGAGATTCTAGCCGTATTTAA 1740 0.4207 MRFASFFTRAFQRHPSCSKILLLCTLSGGGLLSYSESQSESITGSPASNTNSDVPAKKKVIVLGTGWGGTSFLKDLDASLYDVQVVSPCNYFAFTPLLPSVTCGTVEARSIVEPVRNMVKKRKGDIKFWEAECLKIDHANKTVLCRSNIGNNLVGSGEFSLEYDYLVVAIGAQVNTFNTPGVKEHCHFLKEVEDAQKIRRAVIDCFEKAVLPSLSDEERRTNLHFVVVGGGPTGVEFAAELHDHFQEDLVNLYPSVKDFVNITVIQSGDHILNTFDERISLFAEEKFGRDGIKVQTGRRVISVDDKNITMKAKSTGEIYSVPHGLVIWSTGIATRPVVRDFMEQIGQGKRHVLATNEWLRVKGCESVYAIGDCSSIDQQKIMDDISAIFEAADKDKSGTLTVAELKDVLDDIIVRYPQFELYLKSKHILDLSTLWKDSEGNYREEIDIEGFKMALSHMDSQMKSLPATAQVASQQGEYLARCFNRMHQCEEHPEGPRRFKGSGRHTFLPFRYKHFGQFAPLGGEQAAAELPGDWVAMGHSTQWLWYSVYASKQVSWRTRMLVISDWTRRFIFGRDSSRI* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0813 579 SUPERFAMILY FAD/NAD(P)-binding domain 57 276 IPR036188 -
Amo18g0813 579 SUPERFAMILY FAD/NAD(P)-binding domain 222 377 IPR036188 -
Amo18g0813 579 ProSitePatterns EF-hand calcium-binding domain. 393 405 IPR018247 -
Amo18g0813 579 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
Amo18g0813 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 60 79 - -
Amo18g0813 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 163 181 - -
Amo18g0813 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 224 242 - -
Amo18g0813 579 PANTHER NADH DEHYDROGENASE 55 579 IPR045024 GO:0003954|GO:0006116
Amo18g0813 579 SUPERFAMILY EF-hand 338 466 IPR011992 -
Amo18g0813 579 Gene3D - 436 578 - -
Amo18g0813 579 Gene3D - 48 405 - -
Amo18g0813 579 Pfam Pyridine nucleotide-disulphide oxidoreductase 58 382 IPR023753 GO:0016491
Amo18g0813 579 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 55 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0813 Amo-Chr18 11700634 11704978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0813 1 579 Chloroplast and Mitochondria Gene Families AT4G21490 61.775 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0813 K03885 - zju:107416753 920.228