Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0801 ATGAAAGCAATCCAATTCCGTGTGCCTAGGTTGTACTATGACGCATTTCATCCCACAATCCACTTCCAGATACCATCATCATCATTATCACTCCCTAAACCAATGATCTCCCGCTGCAGCATAGTCCAATCTCACCACCCCAATTTCACAATCTCATACCTGATTGACTCATGTGGTCTCTCTCCAGACACTGCTGCTCTTACTTCCCAAAAGCTTCACCTTCCTTCTGCTGAAAGACCAAACTCAATTCTCACCCTTCTCAGGGAGCATGGTTTCACAGATACCCAGATTTCAAACCTCATCAGAAAATGTCCATTGCTCCTCTTAGTAAACCCAGATATCCTCTTGCCAAAGTTTCAATTTTTCCTCTCCATTGGGATTTCCAATACCAACCTCGCAAGAACCCTAACCGCTGACCCAACCCTTTTGACCTGGAGCTTGGAGAAACAGATCATACCCTCTTACAATTTTCTCAAGAGTGTGTTGATTTCTGATGAAAAGGTTGCAGCTTCATTGAAGCGCACATCTTGGGTCTTCCTCGAGGATCACAAGAAGAACCTCGTACCAAACCTCAATCTCCTAAAAGAGATGGATGTTCCTGAATCATGTGTTATGCTGTTGCTTACTCATTTCCCGGAGGCATTGATGCAGAAAAAGGAAAACTTTGCAAAGCTTTCTAAGGAGATTAAAGAAATGGGGTTTAATCCAAAAAAGACAACATTTGTGTTGGCCATTCATGTGCTCTCAGGTGAGGGTAACAAATCCATATATAACCGCTGTTGCGAGGTTTATAAGAGGTGGGGTTGGTCAGATGATGACATCCTTATGGCATTCAAGAAGCACCCACTTTGTATGATACTTTCAGAGGATAAGATAATGAAGACAATGGATTACTTGGTGAATAAGATGAGTTGGCCTTCAGGGATGATTGTTAGGTGCCCAGTTGTGTTGTTTTTCAGCTTGGAGAAGAGGATTAAACCTAGGTGTTCTGTTGCTAAGGTTTTGTTGATGAAGGGATTGATTAAGAGGAAGTTGAGCTTGTCCACTTTGCTGTTGCCTGATGAGGACAGTTTCTTGGAGAAGTATGTGATCAAGTATGAGCTGCAGATCTGGGAAGGTAAAGAAGCTGAATGTGACGGTGTTGAATCGAGTTTGGGAGGTAGAAGGAAAGGTGGTCAGAGGTGGAATTGGAGTGGAAGGAGGGGATGCGGTGGAGGTGGGAGAAATGAAGGTGAGAGAGAGAAGCAGGAGCAGAGGAGGAAGACGGAAAGGTGGAAGAAGATAAAGGGTTAA 1293 0.4377 MKAIQFRVPRLYYDAFHPTIHFQIPSSSLSLPKPMISRCSIVQSHHPNFTISYLIDSCGLSPDTAALTSQKLHLPSAERPNSILTLLREHGFTDTQISNLIRKCPLLLLVNPDILLPKFQFFLSIGISNTNLARTLTADPTLLTWSLEKQIIPSYNFLKSVLISDEKVAASLKRTSWVFLEDHKKNLVPNLNLLKEMDVPESCVMLLLTHFPEALMQKKENFAKLSKEIKEMGFNPKKTTFVLAIHVLSGEGNKSIYNRCCEVYKRWGWSDDDILMAFKKHPLCMILSEDKIMKTMDYLVNKMSWPSGMIVRCPVVLFFSLEKRIKPRCSVAKVLLMKGLIKRKLSLSTLLLPDEDSFLEKYVIKYELQIWEGKEAECDGVESSLGGRRKGGQRWNWSGRRGCGGGGRNEGEREKQEQRRKTERWKKIKG* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0801 430 MobiDBLite consensus disorder prediction 382 430 - -
Amo18g0801 430 MobiDBLite consensus disorder prediction 406 423 - -
Amo18g0801 430 Pfam mTERF 211 358 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 Pfam mTERF 84 236 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 PANTHER CGI-12 PROTEIN-RELATED 30 370 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 Gene3D Transcription termination factor 3, mitochondrial 134 372 IPR038538 -
Amo18g0801 430 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 SMART mt_12 98 128 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Amo18g0801 430 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 30 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0801 Amo-Chr18 11492100 11493447 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo18g0801 mTERF 1.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0801 K15032 - ahf:112805356 472.241