Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0789 ATGACTTGCAAGAATAACAAGAACAATGAGGATGGGGCCTTGGACGCCGACAGAGGACGCCATGCTTATCGAGCGCTAAATGGAGAGAAGTTGAGGAGAAGCAGCAATAGTTGTAGGCATAGATGGTGCGAACATCTAAAGCCTGATTTGAAGAAGGATCCTTTCTCTAAAGAAGAGGAGAAACTCATCGTTGATCTTCATGCTCAAGAGAATTACGGAGAGATTCCTGTGCCCATCTGGGTTCCTGAAAGATCACGCAATGACATCAATAACTTTTGGAAGAAAAGAATGAGGAAGCGCCCAAGAGAATGGTTACAGGAAGATCCTCCACAAATGCTTAAACAAGCACGACACTTTTCTTCATCAGCTTCATCATCGTCATTTAATTCGGTCTTAGCTTCATGTTACCCTAAAAATGATCTTAGTAGTGTTGAACAACCGCCAAATATTTCTGCTGCAAATCCTCCACAAAATCATAATCAGAAACAACCTAATCAAACTTCTTCTTCTTCGTACACCAATTATAATGCAAGCTTTGTATTGCCATTAGCTCCTATGTCTCCTTGTTATAGAGCATCATCAACATCATCGTTACCTCAATGTAAAACTGGTGGTTTATTGAATGATGTGGTGATGGAGGGTAATGCTCTTTGTCCCAAGGGAAAGTCAAACATGGATGCAACCATTGTTATTGGTAAGGAGGAAGAAGAATTAGCTGATAAGAGAAAAATTATTGAAGAGCCACCATTGCCACCAGTTGGAACCAATAAAGAGGAAGAAGCAGCCACCATTATTGCAACTCAAAGCTCTATTGATCCAAGCTCTCCTCATCAATTGATTTCAACAGAGAAGAATGATAATGGAAGTTGTAATAATAACAAGGAGGCATTGAATAATTCCATGCACCAACAAGTGGACGATGAAACGCTTAGCATACTTAAAAATACTCCACTATATTCGCCAGTGCATAAGTGGTACGAAATTGATGATGACAAGGACTTTCCTGATGATGATGATGGAGATTGGTATGTTAGTAACCTATGGAATTTTGATTGA 1056 0.3977 MTCKNNKNNEDGALDADRGRHAYRALNGEKLRRSSNSCRHRWCEHLKPDLKKDPFSKEEEKLIVDLHAQENYGEIPVPIWVPERSRNDINNFWKKRMRKRPREWLQEDPPQMLKQARHFSSSASSSSFNSVLASCYPKNDLSSVEQPPNISAANPPQNHNQKQPNQTSSSSYTNYNASFVLPLAPMSPCYRASSTSSLPQCKTGGLLNDVVMEGNALCPKGKSNMDATIVIGKEEEELADKRKIIEEPPLPPVGTNKEEEAATIIATQSSIDPSSPHQLISTEKNDNGSCNNNKEALNNSMHQQVDDETLSILKNTPLYSPVHKWYEIDDDKDFPDDDDGDWYVSNLWNFD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0789 351 MobiDBLite consensus disorder prediction 101 120 - -
Amo18g0789 351 Gene3D - 49 101 - -
Amo18g0789 351 SUPERFAMILY Homeodomain-like 32 102 IPR009057 -
Amo18g0789 351 MobiDBLite consensus disorder prediction 142 172 - -
Amo18g0789 351 Pfam Myb-like DNA-binding domain 26 61 - -
Amo18g0789 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 50 IPR017930 -
Amo18g0789 351 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Amo18g0789 351 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 30 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0789 Amo-Chr18 11311671 11314020 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0789 31 126 MYB Transcription Factor Family AT5G06100 41.667 5.18e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0789 K09422 - ahf:112771967 345.125