Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0785 ATGATCTCCAATAATAACAAGAACAATGAGGATGGTGAGTCTTGGAGAGATGATTTGAGAAAGGGGCCTTGGACGCCGAGAGAGGACGCCATACTTATCGAGCAGGTAGAGAAGTGTGGCAAAGGTAATTGGAGTTTAATTCGAAAGAATTCTGAGTTGAGGAGAAGTGGCAAAAGTTGTAGGCTTAGATGGTCGAACCATCTAAATCCTGACTTGAAGAAGGGTCCTTTCTCTGAAAAAGAGGAGAAAACCATTGATGATCTTCATGCTAAGTTTGGAAACAAATGGGCTCTAATGGCTACCAAGAAGAAGAAGACGACTGGGGCAACAGAGAAATGCCATCGCACTTCGCTGAGAGTCATCGTCGAGAAGCAATCGAATAGAGGAGCTTTTTCATGGGGCAAGGTGACTTTGAGGTTGGTGAGTGGTGTCAGTGGCTGGGTTGTGCCTCAGCCTCACTGGATGCCTTCAATCTTCATTGTGCACTACATGAATGCGTGCCCTAATTTTGAGAAGTGTATGTTCGCCGGGCCGGGTCTGGGTGACTCAAGCTATGGCCCGGTTCCTGGAAGATCAGACAATGACATCAAAAACTTTTGGAACTCAAGAATGAAGAAGCGCCTAAGAGAATATCCTCCACAAATAACGGTTCAACAAGCACAACACTTTTCTTCATCACCATTTTATTCGGTCTTAGCTTCATGTTACCCTAAAAATAATCTCAATGTTGAACTACCTTCAAATATTTCTGCTGCCAATCCTCCACCAAATCATAATCAGAAACAACCTAATCAAAATGATTCTTCTTCTTCTTCTTCTTCTTTCTCTTGCACCAATAATAATGCAAGTTTTGTATTGCCATTAACCCATGTGTCTCCTTATTGTAAGAGTAGTGGTTTATTGAATGATGTGGTGATGGAGGGTAATGCTCTTTGTCGCAAGGGAAAGTCAAAGATGGATGCAACCATTGTTATTGGTAGGGAGGAAGAAGAATTAGCTGATAAGAGAAAAATTATTGAAGAGCCACCATTGCCACCAGTTGGAACCAGTAAAGAGGAAGAAACAGCCACCATTATTGCAACTCAAAGCTCTTCTCATCAATTGATTTCAACAGAGAAGAATGATAATGGAGGTTGTAACAATAACAAGGAGGCATTGAATAATTCTATGCCACAAATGGACGATGAATTGCTTAGCATACTTAAAAATTGTCCAATATATTCGCCAGTGCGAAAGTGGTACAAAGTTGATAATGATGAGGACTCCCTATGA 1272 0.4143 MISNNNKNNEDGESWRDDLRKGPWTPREDAILIEQVEKCGKGNWSLIRKNSELRRSGKSCRLRWSNHLNPDLKKGPFSEKEEKTIDDLHAKFGNKWALMATKKKKTTGATEKCHRTSLRVIVEKQSNRGAFSWGKVTLRLVSGVSGWVVPQPHWMPSIFIVHYMNACPNFEKCMFAGPGLGDSSYGPVPGRSDNDIKNFWNSRMKKRLREYPPQITVQQAQHFSSSPFYSVLASCYPKNNLNVELPSNISAANPPPNHNQKQPNQNDSSSSSSSFSCTNNNASFVLPLTHVSPYCKSSGLLNDVVMEGNALCRKGKSKMDATIVIGREEEELADKRKIIEEPPLPPVGTSKEEETATIIATQSSSHQLISTEKNDNGGCNNNKEALNNSMPQMDDELLSILKNCPIYSPVRKWYKVDNDEDSL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0785 423 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Amo18g0785 423 SMART sant 73 120 IPR001005 -
Amo18g0785 423 SMART sant 20 70 IPR001005 -
Amo18g0785 423 MobiDBLite consensus disorder prediction 1 22 - -
Amo18g0785 423 Gene3D - 76 208 - -
Amo18g0785 423 Pfam Myb-like DNA-binding domain 24 83 - -
Amo18g0785 423 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 273 - -
Amo18g0785 423 MobiDBLite consensus disorder prediction 246 274 - -
Amo18g0785 423 Gene3D - 21 73 - -
Amo18g0785 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Amo18g0785 423 SUPERFAMILY Homeodomain-like 22 98 IPR009057 -
Amo18g0785 423 CDD SANT 23 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0785 Amo-Chr18 11280255 11283413 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0785 19 102 MYB Transcription Factor Family AT2G32460 66.667 6.38e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo18g0785 Myb_DNA-bind_6 5.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0785 K09422 - ahf:112705247 427.172