Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0779 ATGTTACCAAATACTAAGTCAAACAATGGACGCAAGGTCAAGATAGGAGTTGGAGTTGGAGTCTCAGTTGGCGTATTATGTGGCCTTCTCTTAGCATTCTGTTTGATATGGAAAAGACGAAAAAGGGCCACTCTGAAAGAGACTAATGCAGCATTAAAGGATCAGTCCATGGAAGAACAAGAGGAAGATCCAGAGGTTCCATTATATGACCTAACAGTTATAGCTTCTTCCACTGATAACTTTTCACACAAAAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTGTTTAAGGGAACATTAGAAAATGGGCAAAGAATTGCAGTTAAGAGACTTTCAGCTAGTTCCGGACAAGGGATCAAGGAATTTAAAAATGAAATTGCCTTGATAGCCAAACTTCAGCATCGTAATCTTGTAAAGCTTTGGTTTCTAATTTTGTGTTTTTCTAACTGGTTGTCAACTGTCAAGAAGGCTTAG 474 0.3882 MLPNTKSNNGRKVKIGVGVGVSVGVLCGLLLAFCLIWKRRKRATLKETNAALKDQSMEEQEEDPEVPLYDLTVIASSTDNFSHKNKLGEGGFGPVFKGTLENGQRIAVKRLSASSGQGIKEFKNEIALIAKLQHRNLVKLWFLILCFSNWLSTVKKA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0779 157 PANTHER - 6 140 - -
Amo18g0779 157 Gene3D Phosphorylase Kinase; domain 1 39 146 - -
Amo18g0779 157 SUPERFAMILY Protein kinase-like (PK-like) 61 141 IPR011009 -
Amo18g0779 157 ProSiteProfiles Protein kinase domain profile. 81 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0779 157 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 140 - -
Amo18g0779 157 Pfam Protein kinase domain 82 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0779 157 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0779 Amo-Chr18 11153108 11158050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0779 4 140 Receptor kinase-like Gene Family AT4G23190 41.429 9.56e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g0779 Pkinase 2.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0779 - - aip:107613425 281.952